cytoscape.js 中是否有边缘加权 spring 嵌入式布局？
Is there a edge weighted spring embedded layout in cytoscape.js?
我们需要在我们的 Angular 应用程序中显示节点和边图，我们选择在 cytoscape over high charts/amCharts/D3 中执行此操作。 Cytoscape 的加载速度更快，并且是唯一可以处理我们拥有的 1000 多个节点的库。其他人打破或滞后。
我们下载了 cytoscape 应用程序并能够看到布局 'Edge weighted spring embedded'。它以类似地球仪的整体布局显示了我们相互连接的节点。
现在我想要在 cytoscape js 中使用相同的布局，看起来我们在 https://js.cytoscape.org/
中只有少数布局
这种布局在cytoscape js中可行吗？如何做到这一点？ （目前正在使用 fcose 布局，但我们真的很喜欢“边缘加权 spring 嵌入式布局带来的地球外观。
编辑：
再举一个例子：我想在cytoscape.js中实现这个布局。
我应该遵循什么布局？或者这是js中没有的东西，只在桌面应用程序中可用
我认为有3个方案：
- Compound Spring 嵌入器布局 cose
- Bilkent 的复合 Spring 嵌入器布局（用于增强复合节点放置）cose-bilkent
- 基于约束的布局cola.js
它们都使用某种力导向布局，我认为您应该尝试一下并使用最适合您需要的布局。您可以为每个布局设置许多参数，因此也请仔细查看它们。例如，如果您在 cola.js 布局中将 infinite 设置为 true，您将看到您可以四处移动节点并看到布局强制它们回到或适合的位置：
document.addEventListener("DOMContentLoaded", function() {
var cy = (window.cy = cytoscape({
container: document.getElementById("cy"),
autounselectify: true,
boxSelectionEnabled: false,
layout: {
name: "cola",
infinite: true,
fit: false
},
style: [{
selector: "node",
css: {
"background-color": "#f92411"
}
},
{
selector: "edge",
css: {
"line-color": "#f92411"
}
}
],
elements: {
nodes: [{
data: {
id: "1",
label: "P"
}
},
{
data: {
id: "2",
label: "sucrose phosphate phosphatase"
}
},
{
data: {
id: "4",
label: "sucrose 6-phosphate"
}
},
{
data: {
id: "6",
label: "sucrose"
}
},
{
data: {
id: "8",
label: "invertase"
}
},
{
data: {
id: "10",
label: "fructose"
}
},
{
data: {
id: "12",
label: "fructokinase"
}
},
{
data: {
id: "14",
label: "fructose 6-phosphate"
}
},
{
data: {
id: "20",
label: "phosphoglucose isomerase"
}
},
{
data: {
id: "22",
label: "glucose 6-phosphate"
}
},
{
data: {
id: "28",
label: "glucose"
}
},
{
data: {
id: "30",
label: "hexokinase"
}
},
{
data: {
id: "33",
label: "sucrose synthase"
}
},
{
data: {
id: "36",
label: "UDP - glucose"
}
},
{
data: {
id: "38",
label: "sucrose phosphate synthase"
}
},
{
data: {
id: "41",
label: "UDP"
}
},
{
data: {
id: "44",
label: "fructose 6-phosphate"
}
},
{
data: {
id: "46",
label: "ATP"
}
},
{
data: {
id: "47",
label: "ATP"
}
},
{
data: {
id: "52",
label: "ATP"
}
},
{
data: {
id: "57",
label: "ADP"
}
},
{
data: {
id: "66",
label: "PP"
}
},
{
data: {
id: "71",
label: "UTP"
}
},
{
data: {
id: "76",
label: "UDP glucose pyrophosphorylase"
}
},
{
data: {
id: "80",
label: "glucose 1-phosphate"
}
},
{
data: {
id: "86",
label: "phospho- glucomutase (cPGM)"
}
},
{
data: {
id: "89",
label: "G1P transporter"
}
},
{
data: {
id: "90",
label: "P"
}
},
{
data: {
id: "95",
label: "P"
}
},
{
data: {
id: "102",
label: "P"
}
},
{
data: {
id: "103",
label: "P"
}
},
{
data: {
id: "104",
label: "G6P transporter"
}
},
{
data: {
id: "109",
label: "glucose 6-phosphate"
}
},
{
data: {
id: "115",
label: "phospho- glucomutase (cPGM)"
}
},
{
data: {
id: "121",
label: "glucose 1-phosphate"
}
},
{
data: {
id: "128",
label: "ADPglucose pyrophosphorylase (pAGPase)"
}
},
{
data: {
id: "130",
label: "ADP - glucose"
}
},
{
data: {
id: "136",
label: "PP"
}
},
{
data: {
id: "141",
label: "ATP"
}
},
{
data: {
id: "148",
label: "inorganic diphosphatase"
}
},
{
data: {
id: "149",
label: "P"
}
},
{
data: {
id: "156",
label: "phosphate transporter"
}
},
{
data: {
id: "158",
label: "P"
}
},
{
data: {
id: "164",
label: "starch synthase (simpl.)"
}
},
{
data: {
id: "166",
label: "ADP"
}
},
{
data: {
id: "172",
label: "starch"
}
},
{
data: {
id: "178",
label: "ATP/ADP transporter"
}
},
{
data: {
id: "179",
label: "ADP"
}
},
{
data: {
id: "184",
label: "ADP"
}
},
{
data: {
id: "189",
label: "ATP"
}
}
],
edges: [{
data: {
source: "2",
target: "1"
}
},
{
data: {
source: "4",
target: "2"
}
},
{
data: {
source: "2",
target: "6"
}
},
{
data: {
source: "6",
target: "8"
}
},
{
data: {
source: "8",
target: "10"
}
},
{
data: {
source: "12",
target: "14"
}
},
{
data: {
source: "14",
target: "20"
}
},
{
data: {
source: "20",
target: "22"
}
},
{
data: {
source: "8",
target: "28"
}
},
{
data: {
source: "28",
target: "30"
}
},
{
data: {
source: "30",
target: "22"
}
},
{
data: {
source: "6",
target: "33"
}
},
{
data: {
source: "33",
target: "10"
}
},
{
data: {
source: "33",
target: "36"
}
},
{
data: {
source: "36",
target: "38"
}
},
{
data: {
source: "38",
target: "4"
}
},
{
data: {
source: "38",
target: "41"
}
},
{
data: {
source: "41",
target: "33"
}
},
{
data: {
source: "44",
target: "38"
}
},
{
data: {
source: "52",
target: "12"
}
},
{
data: {
source: "12",
target: "57"
}
},
{
data: {
source: "46",
target: "30"
}
},
{
data: {
source: "30",
target: "47"
}
},
{
data: {
source: "71",
target: "76"
}
},
{
data: {
source: "76",
target: "66"
}
},
{
data: {
source: "76",
target: "36"
}
},
{
data: {
source: "80",
target: "76"
}
},
{
data: {
source: "22",
target: "86"
}
},
{
data: {
source: "86",
target: "80"
}
},
{
data: {
source: "95",
target: "89"
}
},
{
data: {
source: "89",
target: "90"
}
},
{
data: {
source: "102",
target: "104"
}
},
{
data: {
source: "80",
target: "89"
}
},
{
data: {
source: "104",
target: "109"
}
},
{
data: {
source: "115",
target: "109"
}
},
{
data: {
source: "121",
target: "89"
}
},
{
data: {
source: "121",
target: "115"
}
},
{
data: {
source: "121",
target: "128"
}
},
{
data: {
source: "128",
target: "130"
}
},
{
data: {
source: "141",
target: "128"
}
},
{
data: {
source: "128",
target: "136"
}
},
{
data: {
source: "136",
target: "148"
}
},
{
data: {
source: "148",
target: "149"
}
},
{
data: {
source: "149",
target: "156"
}
},
{
data: {
source: "156",
target: "158"
}
},
{
data: {
source: "130",
target: "164"
}
},
{
data: {
source: "164",
target: "166"
}
},
{
data: {
source: "178",
target: "179"
}
},
{
data: {
source: "184",
target: "178"
}
},
{
data: {
source: "178",
target: "189"
}
},
{
data: {
source: "141",
target: "178"
}
},
{
data: {
source: "104",
target: "103"
}
},
{
data: {
source: "10",
target: "12"
}
},
{
data: {
source: "164",
target: "172"
}
},
{
data: {
source: "22",
target: "104"
}
}
]
}
}));
cy.unbind("tapend");
cy.bind("tapend", "node", function() {
cy.animate({
fit: {
eles: cy.elements(),
padding: 20
},
center: {
eles: cy.elements()
}
}, {
duration: 500
});
});
});
body {
font-family: helvetica;
font-size: 14px;
}
#cy {
width: 100%;
height: 100%;
position: absolute;
left: 0;
top: 0;
z-index: 999;
}
h1 {
opacity: 0.5;
font-size: 1em;
}
<!DOCTYPE>
<html>
<head>
<title>cytoscape-cola.js demo</title>
<meta name="viewport" content="width=device-width, user-scalable=no, initial-scale=1, maximum-scale=1">
<script src="https://unpkg.com/cytoscape/dist/cytoscape.min.js"></script>
<!-- for testing with local version of cytoscape.js -->
<!--<script src="../cytoscape.js/build/cytoscape.js"></script>-->
<script src="https://unpkg.com/webcola/WebCola/cola.min.js"></script>
<script src="https://cdn.jsdelivr.net/npm/cytoscape-cola@2.3.0/cytoscape-cola.min.js"></script>
</head>
<body>
<h1>cytoscape-cola demo</h1>
<div id="cy"></div>
</body>
</html>
您可以尝试“Euler”布局，它可能会提供您想要的相同预期布局。是euler.js。我将此布局用于我自己的数据集，并提供与您在上面显示的类似布局。
我们需要在我们的 Angular 应用程序中显示节点和边图，我们选择在 cytoscape over high charts/amCharts/D3 中执行此操作。 Cytoscape 的加载速度更快，并且是唯一可以处理我们拥有的 1000 多个节点的库。其他人打破或滞后。
我们下载了 cytoscape 应用程序并能够看到布局 'Edge weighted spring embedded'。它以类似地球仪的整体布局显示了我们相互连接的节点。
现在我想要在 cytoscape js 中使用相同的布局，看起来我们在 https://js.cytoscape.org/
中只有少数布局这种布局在cytoscape js中可行吗？如何做到这一点？ （目前正在使用 fcose 布局，但我们真的很喜欢“边缘加权 spring 嵌入式布局带来的地球外观。
编辑：
再举一个例子：我想在cytoscape.js中实现这个布局。 我应该遵循什么布局？或者这是js中没有的东西，只在桌面应用程序中可用
我认为有3个方案：
- Compound Spring 嵌入器布局 cose
- Bilkent 的复合 Spring 嵌入器布局（用于增强复合节点放置）cose-bilkent
- 基于约束的布局cola.js
它们都使用某种力导向布局，我认为您应该尝试一下并使用最适合您需要的布局。您可以为每个布局设置许多参数，因此也请仔细查看它们。例如，如果您在 cola.js 布局中将 infinite 设置为 true，您将看到您可以四处移动节点并看到布局强制它们回到或适合的位置：
document.addEventListener("DOMContentLoaded", function() {
var cy = (window.cy = cytoscape({
container: document.getElementById("cy"),
autounselectify: true,
boxSelectionEnabled: false,
layout: {
name: "cola",
infinite: true,
fit: false
},
style: [{
selector: "node",
css: {
"background-color": "#f92411"
}
},
{
selector: "edge",
css: {
"line-color": "#f92411"
}
}
],
elements: {
nodes: [{
data: {
id: "1",
label: "P"
}
},
{
data: {
id: "2",
label: "sucrose phosphate phosphatase"
}
},
{
data: {
id: "4",
label: "sucrose 6-phosphate"
}
},
{
data: {
id: "6",
label: "sucrose"
}
},
{
data: {
id: "8",
label: "invertase"
}
},
{
data: {
id: "10",
label: "fructose"
}
},
{
data: {
id: "12",
label: "fructokinase"
}
},
{
data: {
id: "14",
label: "fructose 6-phosphate"
}
},
{
data: {
id: "20",
label: "phosphoglucose isomerase"
}
},
{
data: {
id: "22",
label: "glucose 6-phosphate"
}
},
{
data: {
id: "28",
label: "glucose"
}
},
{
data: {
id: "30",
label: "hexokinase"
}
},
{
data: {
id: "33",
label: "sucrose synthase"
}
},
{
data: {
id: "36",
label: "UDP - glucose"
}
},
{
data: {
id: "38",
label: "sucrose phosphate synthase"
}
},
{
data: {
id: "41",
label: "UDP"
}
},
{
data: {
id: "44",
label: "fructose 6-phosphate"
}
},
{
data: {
id: "46",
label: "ATP"
}
},
{
data: {
id: "47",
label: "ATP"
}
},
{
data: {
id: "52",
label: "ATP"
}
},
{
data: {
id: "57",
label: "ADP"
}
},
{
data: {
id: "66",
label: "PP"
}
},
{
data: {
id: "71",
label: "UTP"
}
},
{
data: {
id: "76",
label: "UDP glucose pyrophosphorylase"
}
},
{
data: {
id: "80",
label: "glucose 1-phosphate"
}
},
{
data: {
id: "86",
label: "phospho- glucomutase (cPGM)"
}
},
{
data: {
id: "89",
label: "G1P transporter"
}
},
{
data: {
id: "90",
label: "P"
}
},
{
data: {
id: "95",
label: "P"
}
},
{
data: {
id: "102",
label: "P"
}
},
{
data: {
id: "103",
label: "P"
}
},
{
data: {
id: "104",
label: "G6P transporter"
}
},
{
data: {
id: "109",
label: "glucose 6-phosphate"
}
},
{
data: {
id: "115",
label: "phospho- glucomutase (cPGM)"
}
},
{
data: {
id: "121",
label: "glucose 1-phosphate"
}
},
{
data: {
id: "128",
label: "ADPglucose pyrophosphorylase (pAGPase)"
}
},
{
data: {
id: "130",
label: "ADP - glucose"
}
},
{
data: {
id: "136",
label: "PP"
}
},
{
data: {
id: "141",
label: "ATP"
}
},
{
data: {
id: "148",
label: "inorganic diphosphatase"
}
},
{
data: {
id: "149",
label: "P"
}
},
{
data: {
id: "156",
label: "phosphate transporter"
}
},
{
data: {
id: "158",
label: "P"
}
},
{
data: {
id: "164",
label: "starch synthase (simpl.)"
}
},
{
data: {
id: "166",
label: "ADP"
}
},
{
data: {
id: "172",
label: "starch"
}
},
{
data: {
id: "178",
label: "ATP/ADP transporter"
}
},
{
data: {
id: "179",
label: "ADP"
}
},
{
data: {
id: "184",
label: "ADP"
}
},
{
data: {
id: "189",
label: "ATP"
}
}
],
edges: [{
data: {
source: "2",
target: "1"
}
},
{
data: {
source: "4",
target: "2"
}
},
{
data: {
source: "2",
target: "6"
}
},
{
data: {
source: "6",
target: "8"
}
},
{
data: {
source: "8",
target: "10"
}
},
{
data: {
source: "12",
target: "14"
}
},
{
data: {
source: "14",
target: "20"
}
},
{
data: {
source: "20",
target: "22"
}
},
{
data: {
source: "8",
target: "28"
}
},
{
data: {
source: "28",
target: "30"
}
},
{
data: {
source: "30",
target: "22"
}
},
{
data: {
source: "6",
target: "33"
}
},
{
data: {
source: "33",
target: "10"
}
},
{
data: {
source: "33",
target: "36"
}
},
{
data: {
source: "36",
target: "38"
}
},
{
data: {
source: "38",
target: "4"
}
},
{
data: {
source: "38",
target: "41"
}
},
{
data: {
source: "41",
target: "33"
}
},
{
data: {
source: "44",
target: "38"
}
},
{
data: {
source: "52",
target: "12"
}
},
{
data: {
source: "12",
target: "57"
}
},
{
data: {
source: "46",
target: "30"
}
},
{
data: {
source: "30",
target: "47"
}
},
{
data: {
source: "71",
target: "76"
}
},
{
data: {
source: "76",
target: "66"
}
},
{
data: {
source: "76",
target: "36"
}
},
{
data: {
source: "80",
target: "76"
}
},
{
data: {
source: "22",
target: "86"
}
},
{
data: {
source: "86",
target: "80"
}
},
{
data: {
source: "95",
target: "89"
}
},
{
data: {
source: "89",
target: "90"
}
},
{
data: {
source: "102",
target: "104"
}
},
{
data: {
source: "80",
target: "89"
}
},
{
data: {
source: "104",
target: "109"
}
},
{
data: {
source: "115",
target: "109"
}
},
{
data: {
source: "121",
target: "89"
}
},
{
data: {
source: "121",
target: "115"
}
},
{
data: {
source: "121",
target: "128"
}
},
{
data: {
source: "128",
target: "130"
}
},
{
data: {
source: "141",
target: "128"
}
},
{
data: {
source: "128",
target: "136"
}
},
{
data: {
source: "136",
target: "148"
}
},
{
data: {
source: "148",
target: "149"
}
},
{
data: {
source: "149",
target: "156"
}
},
{
data: {
source: "156",
target: "158"
}
},
{
data: {
source: "130",
target: "164"
}
},
{
data: {
source: "164",
target: "166"
}
},
{
data: {
source: "178",
target: "179"
}
},
{
data: {
source: "184",
target: "178"
}
},
{
data: {
source: "178",
target: "189"
}
},
{
data: {
source: "141",
target: "178"
}
},
{
data: {
source: "104",
target: "103"
}
},
{
data: {
source: "10",
target: "12"
}
},
{
data: {
source: "164",
target: "172"
}
},
{
data: {
source: "22",
target: "104"
}
}
]
}
}));
cy.unbind("tapend");
cy.bind("tapend", "node", function() {
cy.animate({
fit: {
eles: cy.elements(),
padding: 20
},
center: {
eles: cy.elements()
}
}, {
duration: 500
});
});
});
body {
font-family: helvetica;
font-size: 14px;
}
#cy {
width: 100%;
height: 100%;
position: absolute;
left: 0;
top: 0;
z-index: 999;
}
h1 {
opacity: 0.5;
font-size: 1em;
}
<!DOCTYPE>
<html>
<head>
<title>cytoscape-cola.js demo</title>
<meta name="viewport" content="width=device-width, user-scalable=no, initial-scale=1, maximum-scale=1">
<script src="https://unpkg.com/cytoscape/dist/cytoscape.min.js"></script>
<!-- for testing with local version of cytoscape.js -->
<!--<script src="../cytoscape.js/build/cytoscape.js"></script>-->
<script src="https://unpkg.com/webcola/WebCola/cola.min.js"></script>
<script src="https://cdn.jsdelivr.net/npm/cytoscape-cola@2.3.0/cytoscape-cola.min.js"></script>
</head>
<body>
<h1>cytoscape-cola demo</h1>
<div id="cy"></div>
</body>
</html>
您可以尝试“Euler”布局，它可能会提供您想要的相同预期布局。是euler.js。我将此布局用于我自己的数据集，并提供与您在上面显示的类似布局。