Python 有限边界 Voronoi 元胞
Python finite boundary Voronoi cells
我正在尝试改编我在 Whosebug 上找到的代码，以创建具有有限边界的 voronoi 单元格。我在 上找到了下面的代码，但我的问题是，虽然 voronoi 单元不会在边界处消失到无穷大，但它们仍然太远了。即使半径 = 0，山脊顶点也离得太远。理想情况下，我希望边界 voronoi 顶点的间距与中心其余 voronoi 单元的间距相同，即我希望边界处的 voronoi 单元的大小与中心的相似。
我使用的数据点是
points = [[-30.0, 30.370371], [-27.777777, 35.925926], [-34.444443, 58.51852], [-2.9629631, 57.777779], [-17.777779, 75.185181], [-29.25926, 58.148151], [-11.111112, 33.703705], [-11.481482, 40.0], [-27.037037, 40.0], [-7.7777777, 94.444443], [-2.2222223, 122.22222], [-20.370371, 106.66667], [1.1111112, 125.18518], [-6.2962961, 128.88889], [6.666667, 133.7037], [11.851852, 136.2963], [8.5185184, 140.74074], [20.370371, 92.962959], [17.777779, 114.81482], [12.962962, 97.037041], [13.333334, 127.77778], [22.592592, 120.37037], [16.296295, 127.77778], [11.851852, 50.740742], [20.370371, 54.814816], [19.25926, 47.40741], [32.59259, 122.96296], [20.74074, 130.0], [24.814816, 84.814819], [26.296295, 91.111107], [56.296295, 131.48149], [60.0, 141.85185], [32.222221, 136.66667], [53.703705, 147.03703], [87.40741, 196.2963], [34.074074, 159.62964], [34.444443, -2.5925925], [36.666668, -1.8518518], [34.074074, -7.4074073], [35.555557, -18.888889], [76.666664, -39.629627], [35.185184, -37.777779], [25.185184, 14.074074], [42.962959, 32.962963], [35.925926, 9.2592592], [52.222221, 77.777779], [57.777779, 92.222221], [47.037041, 92.59259], [82.222221, 54.074074], [48.888889, 24.444445], [35.925926, 47.777779], [50.740742, 69.259254], [51.111111, 51.851849], [56.666664, -12.222222], [117.40741, -4.4444447], [59.629631, -5.9259262], [66.666664, 134.07408], [91.481483, 127.40741], [66.666664, 141.48149], [53.703705, 4.0740738], [85.185181, 11.851852], [69.629631, 0.37037039], [68.518517, 99.259262], [75.185181, 100.0], [70.370369, 113.7037], [74.444443, 82.59259], [82.222221, 93.703697], [72.222221, 84.444443], [77.777779, 167.03703], [88.888893, 168.88889], [73.703705, 178.88889], [87.037041, 123.7037], [78.518517, 97.037041], [95.555557, 52.962959], [85.555557, 57.037041], [90.370369, 23.333332], [100.0, 28.51852], [88.888893, 37.037037], [87.037041, -42.962959], [89.259262, -24.814816], [93.333328, 7.4074073], [98.518517, 5.185185], [92.59259, 1.4814816], [85.925919, 153.7037], [95.555557, 154.44444], [92.962959, 150.0], [97.037041, 95.925919], [106.66667, 115.55556], [92.962959, 114.81482], [108.88889, 56.296295], [97.777779, 50.740742], [94.074081, 89.259262], [96.666672, 91.851852], [102.22222, 77.777779], [107.40741, 40.370369], [105.92592, 29.629629], [105.55556, -46.296295], [118.51852, -47.777779], [112.22222, -43.333336], [112.59259, 25.185184], [115.92592, 27.777777], [112.59259, 31.851852], [107.03704, -36.666668], [118.88889, -32.59259], [114.07408, -25.555555], [115.92592, 85.185181], [105.92592, 18.888889], [121.11111, 14.444445], [129.25926, -28.51852], [127.03704, -18.518518], [139.25926, -12.222222], [141.48149, 3.7037036], [137.03703, -4.814815], [153.7037, -26.666668], [-2.2222223, 5.5555558], [0.0, 9.6296301], [10.74074, 20.74074], [2.2222223, 54.074074], [4.0740738, 50.740742], [34.444443, 46.296295], [11.481482, 1.4814816], [24.074076, -2.9629631], [74.814819, 79.259254], [67.777779, 152.22223], [57.037041, 127.03704], [89.259262, 12.222222]]
points = np.array(points)
下面是我return的图片，半径为radius = 0。
我猜你可以通过用你的点的凸包来裁剪你的结果来实现。为此，我可能会使用 shapely 模块。
鉴于您链接的 SO post，我假设您正在使用 post 中编写的 voronoi_finite_polygons_2d 函数。所以我认为这可以完成这项工作：
import numpy as np
import matplotlib.pyplot as plt
from shapely.geometry import MultiPoint, Point, Polygon
from scipy.spatial import Voronoi
points = [[-30.0, 30.370371], [-27.777777, 35.925926], [-34.444443, 58.51852], [-2.9629631, 57.777779], [-17.777779, 75.185181], [-29.25926, 58.148151], [-11.111112, 33.703705], [-11.481482, 40.0], [-27.037037, 40.0], [-7.7777777, 94.444443], [-2.2222223, 122.22222], [-20.370371, 106.66667], [1.1111112, 125.18518], [-6.2962961, 128.88889], [6.666667, 133.7037], [11.851852, 136.2963], [8.5185184, 140.74074], [20.370371, 92.962959], [17.777779, 114.81482], [12.962962, 97.037041], [13.333334, 127.77778], [22.592592, 120.37037], [16.296295, 127.77778], [11.851852, 50.740742], [20.370371, 54.814816], [19.25926, 47.40741], [32.59259, 122.96296], [20.74074, 130.0], [24.814816, 84.814819], [26.296295, 91.111107], [56.296295, 131.48149], [60.0, 141.85185], [32.222221, 136.66667], [53.703705, 147.03703], [87.40741, 196.2963], [34.074074, 159.62964], [34.444443, -2.5925925], [36.666668, -1.8518518], [34.074074, -7.4074073], [35.555557, -18.888889], [76.666664, -39.629627], [35.185184, -37.777779], [25.185184, 14.074074], [42.962959, 32.962963], [35.925926, 9.2592592], [52.222221, 77.777779], [57.777779, 92.222221], [47.037041, 92.59259], [82.222221, 54.074074], [48.888889, 24.444445], [35.925926, 47.777779], [50.740742, 69.259254], [51.111111, 51.851849], [56.666664, -12.222222], [117.40741, -4.4444447], [59.629631, -5.9259262], [66.666664, 134.07408], [91.481483, 127.40741], [66.666664, 141.48149], [53.703705, 4.0740738], [85.185181, 11.851852], [69.629631, 0.37037039], [68.518517, 99.259262], [75.185181, 100.0], [70.370369, 113.7037], [74.444443, 82.59259], [82.222221, 93.703697], [72.222221, 84.444443], [77.777779, 167.03703], [88.888893, 168.88889], [73.703705, 178.88889], [87.037041, 123.7037], [78.518517, 97.037041], [95.555557, 52.962959], [85.555557, 57.037041], [90.370369, 23.333332], [100.0, 28.51852], [88.888893, 37.037037], [87.037041, -42.962959], [89.259262, -24.814816], [93.333328, 7.4074073], [98.518517, 5.185185], [92.59259, 1.4814816], [85.925919, 153.7037], [95.555557, 154.44444], [92.962959, 150.0], [97.037041, 95.925919], [106.66667, 115.55556], [92.962959, 114.81482], [108.88889, 56.296295], [97.777779, 50.740742], [94.074081, 89.259262], [96.666672, 91.851852], [102.22222, 77.777779], [107.40741, 40.370369], [105.92592, 29.629629], [105.55556, -46.296295], [118.51852, -47.777779], [112.22222, -43.333336], [112.59259, 25.185184], [115.92592, 27.777777], [112.59259, 31.851852], [107.03704, -36.666668], [118.88889, -32.59259], [114.07408, -25.555555], [115.92592, 85.185181], [105.92592, 18.888889], [121.11111, 14.444445], [129.25926, -28.51852], [127.03704, -18.518518], [139.25926, -12.222222], [141.48149, 3.7037036], [137.03703, -4.814815], [153.7037, -26.666668], [-2.2222223, 5.5555558], [0.0, 9.6296301], [10.74074, 20.74074], [2.2222223, 54.074074], [4.0740738, 50.740742], [34.444443, 46.296295], [11.481482, 1.4814816], [24.074076, -2.9629631], [74.814819, 79.259254], [67.777779, 152.22223], [57.037041, 127.03704], [89.259262, 12.222222]]
points = np.array(points)
vor = Voronoi(points)
regions, vertices = voronoi_finite_polygons_2d(vor)
pts = MultiPoint([Point(i) for i in points])
mask = pts.convex_hull
new_vertices = []
for region in regions:
polygon = vertices[region]
shape = list(polygon.shape)
shape[0] += 1
p = Polygon(np.append(polygon, polygon[0]).reshape(*shape)).intersection(mask)
poly = np.array(list(zip(p.boundary.coords.xy[0][:-1], p.boundary.coords.xy[1][:-1])))
new_vertices.append(poly)
plt.fill(*zip(*poly), alpha=0.4)
plt.plot(points[:,0], points[:,1], 'ko')
plt.title("Clipped Voronois")
plt.show()
更一般地说（即不使用 voronoi_finite_polygons_2d 但直接使用 Voronoi 的输出，如果它符合我的需要），我会这样做：
import numpy as np
import matplotlib.pyplot as plt
from shapely.ops import polygonize,unary_union
from shapely.geometry import LineString, MultiPolygon, MultiPoint, Point
from scipy.spatial import Voronoi
points = [[-30.0, 30.370371], [-27.777777, 35.925926], [-34.444443, 58.51852], [-2.9629631, 57.777779], [-17.777779, 75.185181], [-29.25926, 58.148151], [-11.111112, 33.703705], [-11.481482, 40.0], [-27.037037, 40.0], [-7.7777777, 94.444443], [-2.2222223, 122.22222], [-20.370371, 106.66667], [1.1111112, 125.18518], [-6.2962961, 128.88889], [6.666667, 133.7037], [11.851852, 136.2963], [8.5185184, 140.74074], [20.370371, 92.962959], [17.777779, 114.81482], [12.962962, 97.037041], [13.333334, 127.77778], [22.592592, 120.37037], [16.296295, 127.77778], [11.851852, 50.740742], [20.370371, 54.814816], [19.25926, 47.40741], [32.59259, 122.96296], [20.74074, 130.0], [24.814816, 84.814819], [26.296295, 91.111107], [56.296295, 131.48149], [60.0, 141.85185], [32.222221, 136.66667], [53.703705, 147.03703], [87.40741, 196.2963], [34.074074, 159.62964], [34.444443, -2.5925925], [36.666668, -1.8518518], [34.074074, -7.4074073], [35.555557, -18.888889], [76.666664, -39.629627], [35.185184, -37.777779], [25.185184, 14.074074], [42.962959, 32.962963], [35.925926, 9.2592592], [52.222221, 77.777779], [57.777779, 92.222221], [47.037041, 92.59259], [82.222221, 54.074074], [48.888889, 24.444445], [35.925926, 47.777779], [50.740742, 69.259254], [51.111111, 51.851849], [56.666664, -12.222222], [117.40741, -4.4444447], [59.629631, -5.9259262], [66.666664, 134.07408], [91.481483, 127.40741], [66.666664, 141.48149], [53.703705, 4.0740738], [85.185181, 11.851852], [69.629631, 0.37037039], [68.518517, 99.259262], [75.185181, 100.0], [70.370369, 113.7037], [74.444443, 82.59259], [82.222221, 93.703697], [72.222221, 84.444443], [77.777779, 167.03703], [88.888893, 168.88889], [73.703705, 178.88889], [87.037041, 123.7037], [78.518517, 97.037041], [95.555557, 52.962959], [85.555557, 57.037041], [90.370369, 23.333332], [100.0, 28.51852], [88.888893, 37.037037], [87.037041, -42.962959], [89.259262, -24.814816], [93.333328, 7.4074073], [98.518517, 5.185185], [92.59259, 1.4814816], [85.925919, 153.7037], [95.555557, 154.44444], [92.962959, 150.0], [97.037041, 95.925919], [106.66667, 115.55556], [92.962959, 114.81482], [108.88889, 56.296295], [97.777779, 50.740742], [94.074081, 89.259262], [96.666672, 91.851852], [102.22222, 77.777779], [107.40741, 40.370369], [105.92592, 29.629629], [105.55556, -46.296295], [118.51852, -47.777779], [112.22222, -43.333336], [112.59259, 25.185184], [115.92592, 27.777777], [112.59259, 31.851852], [107.03704, -36.666668], [118.88889, -32.59259], [114.07408, -25.555555], [115.92592, 85.185181], [105.92592, 18.888889], [121.11111, 14.444445], [129.25926, -28.51852], [127.03704, -18.518518], [139.25926, -12.222222], [141.48149, 3.7037036], [137.03703, -4.814815], [153.7037, -26.666668], [-2.2222223, 5.5555558], [0.0, 9.6296301], [10.74074, 20.74074], [2.2222223, 54.074074], [4.0740738, 50.740742], [34.444443, 46.296295], [11.481482, 1.4814816], [24.074076, -2.9629631], [74.814819, 79.259254], [67.777779, 152.22223], [57.037041, 127.03704], [89.259262, 12.222222]]
points = np.array(points)
vor = Voronoi(points)
lines = [
LineString(vor.vertices[line])
for line in vor.ridge_vertices if -1 not in line
]
convex_hull = MultiPoint([Point(i) for i in points]).convex_hull.buffer(2)
result = MultiPolygon(
[poly.intersection(convex_hull) for poly in polygonize(lines)])
result = MultiPolygon(
[p for p in result]
+ [p for p in convex_hull.difference(unary_union(result))])
plt.plot(points[:,0], points[:,1], 'ko')
for r in result:
plt.fill(*zip(*np.array(list(
zip(r.boundary.coords.xy[0][:-1], r.boundary.coords.xy[1][:-1])))),
alpha=0.4)
plt.show()
减去凸包上的小缓冲区，结果看起来应该是一样的：
或者，如果您想要的结果在外观上略低于 "raw"，您可以尝试使用缓冲方法（及其 resolution/join_style/cap_style 属性）你的点（and/or 凸包的缓冲区）：
pts = MultiPoint([Point(i) for i in points])
mask = pts.convex_hull.union(pts.buffer(10, resolution=5, cap_style=3))
result = MultiPolygon(
[poly.intersection(mask) for poly in polygonize(lines)])
然后得到类似的东西（你可以取得更好的..！）：
从 mgc 扩展上面的有用答案，并再次使用 中的 voronoi_finite_polygons_2d，这是将 Voronoi 镶嵌切割成任意形状的解决方案（此处来自二进制掩码）。这里唯一的额外工作是从你的面具制作一个多边形。我确信还有其他（可能更好）方法可以像这样对蒙版进行多边形化，但这对我的目的有用。
import matplotlib.pyplot as plt
import numpy as np
from scipy.ndimage.morphology import binary_erosion
from scipy.spatial import Voronoi
from shapely.geometry import Point, Polygon
from skimage import draw
from sklearn.neighbors import KDTree
def get_circular_se(radius=2):
N = (radius * 2) + 1
se = np.zeros(shape=[N,N])
for i in range(N):
for j in range(N):
se[i,j] = (i - N / 2)**2 + (j - N / 2)**2 <= radius**2
se = np.array(se, dtype="uint8")
return se
def polygonize_by_nearest_neighbor(pp):
"""Takes a set of xy coordinates pp Numpy array(n,2) and reorders the array to make
a polygon using a nearest neighbor approach.
"""
# start with first index
pp_new = np.zeros_like(pp)
pp_new[0] = pp[0]
p_current_idx = 0
tree = KDTree(pp)
for i in range(len(pp) - 1):
nearest_dist, nearest_idx = tree.query([pp[p_current_idx]], k=4) # k1 = identity
nearest_idx = nearest_idx[0]
# finds next nearest point along the contour and adds it
for min_idx in nearest_idx[1:]: # skip the first point (will be zero for same pixel)
if not pp[min_idx].tolist() in pp_new.tolist(): # make sure it's not already in the list
pp_new[i + 1] = pp[min_idx]
p_current_idx = min_idx
break
pp_new[-1] = pp[0]
return pp_new
#generates a circular mask
side_len = 512
rad = 100
mask = np.zeros(shape=(side_len, side_len))
rr, cc = draw.circle(side_len/2, side_len/2, radius=rad, shape=mask.shape)
mask[rr, cc] = 1
#makes a polygon from the mask perimeter
se = get_circular_se(radius=1)
contour = mask - binary_erosion(mask, structure=se)
pixels_mask = np.array(np.where(contour==1)[::-1]).T
polygon = polygonize_by_nearest_neighbor(pixels_mask)
polygon = Polygon(polygon)
#generates random seeds
points_x = np.random.random_integers(0,side_len,250)
points_y = np.random.random_integers(0,side_len,250)
points = (np.vstack((points_x,points_y))).T
# returns a list of the centroids that are contained within the polygon
new_points = []
for point in points:
if polygon.contains(Point(point)):
new_points.append(point)
#performs voronoi tesselation
if len(points) > 3: #otherwise the tesselation won't work
vor = Voronoi(new_points)
regions, vertices = voronoi_finite_polygons_2d(vor)
#clips tesselation to the mask
new_vertices = []
for region in regions:
poly_reg = vertices[region]
shape = list(poly_reg.shape)
shape[0] += 1
p = Polygon(np.append(poly_reg, poly_reg[0]).reshape(*shape)).intersection(polygon)
poly = (np.array(p.exterior.coords)).tolist()
new_vertices.append(poly)
#plots the results
fig, ax = plt.subplots()
ax.imshow(mask,cmap='Greys_r')
for poly in new_vertices:
ax.fill(*zip(*poly), alpha=0.7)
ax.plot(points[:,0],points[:,1],'ro',ms=2)
plt.show()
我正在尝试改编我在 Whosebug 上找到的代码，以创建具有有限边界的 voronoi 单元格。我在 上找到了下面的代码，但我的问题是，虽然 voronoi 单元不会在边界处消失到无穷大，但它们仍然太远了。即使半径 = 0，山脊顶点也离得太远。理想情况下，我希望边界 voronoi 顶点的间距与中心其余 voronoi 单元的间距相同，即我希望边界处的 voronoi 单元的大小与中心的相似。
我使用的数据点是
points = [[-30.0, 30.370371], [-27.777777, 35.925926], [-34.444443, 58.51852], [-2.9629631, 57.777779], [-17.777779, 75.185181], [-29.25926, 58.148151], [-11.111112, 33.703705], [-11.481482, 40.0], [-27.037037, 40.0], [-7.7777777, 94.444443], [-2.2222223, 122.22222], [-20.370371, 106.66667], [1.1111112, 125.18518], [-6.2962961, 128.88889], [6.666667, 133.7037], [11.851852, 136.2963], [8.5185184, 140.74074], [20.370371, 92.962959], [17.777779, 114.81482], [12.962962, 97.037041], [13.333334, 127.77778], [22.592592, 120.37037], [16.296295, 127.77778], [11.851852, 50.740742], [20.370371, 54.814816], [19.25926, 47.40741], [32.59259, 122.96296], [20.74074, 130.0], [24.814816, 84.814819], [26.296295, 91.111107], [56.296295, 131.48149], [60.0, 141.85185], [32.222221, 136.66667], [53.703705, 147.03703], [87.40741, 196.2963], [34.074074, 159.62964], [34.444443, -2.5925925], [36.666668, -1.8518518], [34.074074, -7.4074073], [35.555557, -18.888889], [76.666664, -39.629627], [35.185184, -37.777779], [25.185184, 14.074074], [42.962959, 32.962963], [35.925926, 9.2592592], [52.222221, 77.777779], [57.777779, 92.222221], [47.037041, 92.59259], [82.222221, 54.074074], [48.888889, 24.444445], [35.925926, 47.777779], [50.740742, 69.259254], [51.111111, 51.851849], [56.666664, -12.222222], [117.40741, -4.4444447], [59.629631, -5.9259262], [66.666664, 134.07408], [91.481483, 127.40741], [66.666664, 141.48149], [53.703705, 4.0740738], [85.185181, 11.851852], [69.629631, 0.37037039], [68.518517, 99.259262], [75.185181, 100.0], [70.370369, 113.7037], [74.444443, 82.59259], [82.222221, 93.703697], [72.222221, 84.444443], [77.777779, 167.03703], [88.888893, 168.88889], [73.703705, 178.88889], [87.037041, 123.7037], [78.518517, 97.037041], [95.555557, 52.962959], [85.555557, 57.037041], [90.370369, 23.333332], [100.0, 28.51852], [88.888893, 37.037037], [87.037041, -42.962959], [89.259262, -24.814816], [93.333328, 7.4074073], [98.518517, 5.185185], [92.59259, 1.4814816], [85.925919, 153.7037], [95.555557, 154.44444], [92.962959, 150.0], [97.037041, 95.925919], [106.66667, 115.55556], [92.962959, 114.81482], [108.88889, 56.296295], [97.777779, 50.740742], [94.074081, 89.259262], [96.666672, 91.851852], [102.22222, 77.777779], [107.40741, 40.370369], [105.92592, 29.629629], [105.55556, -46.296295], [118.51852, -47.777779], [112.22222, -43.333336], [112.59259, 25.185184], [115.92592, 27.777777], [112.59259, 31.851852], [107.03704, -36.666668], [118.88889, -32.59259], [114.07408, -25.555555], [115.92592, 85.185181], [105.92592, 18.888889], [121.11111, 14.444445], [129.25926, -28.51852], [127.03704, -18.518518], [139.25926, -12.222222], [141.48149, 3.7037036], [137.03703, -4.814815], [153.7037, -26.666668], [-2.2222223, 5.5555558], [0.0, 9.6296301], [10.74074, 20.74074], [2.2222223, 54.074074], [4.0740738, 50.740742], [34.444443, 46.296295], [11.481482, 1.4814816], [24.074076, -2.9629631], [74.814819, 79.259254], [67.777779, 152.22223], [57.037041, 127.03704], [89.259262, 12.222222]]
points = np.array(points)
下面是我return的图片，半径为radius = 0。
我猜你可以通过用你的点的凸包来裁剪你的结果来实现。为此，我可能会使用 shapely 模块。
鉴于您链接的 SO post，我假设您正在使用 post 中编写的 voronoi_finite_polygons_2d 函数。所以我认为这可以完成这项工作：
import numpy as np
import matplotlib.pyplot as plt
from shapely.geometry import MultiPoint, Point, Polygon
from scipy.spatial import Voronoi
points = [[-30.0, 30.370371], [-27.777777, 35.925926], [-34.444443, 58.51852], [-2.9629631, 57.777779], [-17.777779, 75.185181], [-29.25926, 58.148151], [-11.111112, 33.703705], [-11.481482, 40.0], [-27.037037, 40.0], [-7.7777777, 94.444443], [-2.2222223, 122.22222], [-20.370371, 106.66667], [1.1111112, 125.18518], [-6.2962961, 128.88889], [6.666667, 133.7037], [11.851852, 136.2963], [8.5185184, 140.74074], [20.370371, 92.962959], [17.777779, 114.81482], [12.962962, 97.037041], [13.333334, 127.77778], [22.592592, 120.37037], [16.296295, 127.77778], [11.851852, 50.740742], [20.370371, 54.814816], [19.25926, 47.40741], [32.59259, 122.96296], [20.74074, 130.0], [24.814816, 84.814819], [26.296295, 91.111107], [56.296295, 131.48149], [60.0, 141.85185], [32.222221, 136.66667], [53.703705, 147.03703], [87.40741, 196.2963], [34.074074, 159.62964], [34.444443, -2.5925925], [36.666668, -1.8518518], [34.074074, -7.4074073], [35.555557, -18.888889], [76.666664, -39.629627], [35.185184, -37.777779], [25.185184, 14.074074], [42.962959, 32.962963], [35.925926, 9.2592592], [52.222221, 77.777779], [57.777779, 92.222221], [47.037041, 92.59259], [82.222221, 54.074074], [48.888889, 24.444445], [35.925926, 47.777779], [50.740742, 69.259254], [51.111111, 51.851849], [56.666664, -12.222222], [117.40741, -4.4444447], [59.629631, -5.9259262], [66.666664, 134.07408], [91.481483, 127.40741], [66.666664, 141.48149], [53.703705, 4.0740738], [85.185181, 11.851852], [69.629631, 0.37037039], [68.518517, 99.259262], [75.185181, 100.0], [70.370369, 113.7037], [74.444443, 82.59259], [82.222221, 93.703697], [72.222221, 84.444443], [77.777779, 167.03703], [88.888893, 168.88889], [73.703705, 178.88889], [87.037041, 123.7037], [78.518517, 97.037041], [95.555557, 52.962959], [85.555557, 57.037041], [90.370369, 23.333332], [100.0, 28.51852], [88.888893, 37.037037], [87.037041, -42.962959], [89.259262, -24.814816], [93.333328, 7.4074073], [98.518517, 5.185185], [92.59259, 1.4814816], [85.925919, 153.7037], [95.555557, 154.44444], [92.962959, 150.0], [97.037041, 95.925919], [106.66667, 115.55556], [92.962959, 114.81482], [108.88889, 56.296295], [97.777779, 50.740742], [94.074081, 89.259262], [96.666672, 91.851852], [102.22222, 77.777779], [107.40741, 40.370369], [105.92592, 29.629629], [105.55556, -46.296295], [118.51852, -47.777779], [112.22222, -43.333336], [112.59259, 25.185184], [115.92592, 27.777777], [112.59259, 31.851852], [107.03704, -36.666668], [118.88889, -32.59259], [114.07408, -25.555555], [115.92592, 85.185181], [105.92592, 18.888889], [121.11111, 14.444445], [129.25926, -28.51852], [127.03704, -18.518518], [139.25926, -12.222222], [141.48149, 3.7037036], [137.03703, -4.814815], [153.7037, -26.666668], [-2.2222223, 5.5555558], [0.0, 9.6296301], [10.74074, 20.74074], [2.2222223, 54.074074], [4.0740738, 50.740742], [34.444443, 46.296295], [11.481482, 1.4814816], [24.074076, -2.9629631], [74.814819, 79.259254], [67.777779, 152.22223], [57.037041, 127.03704], [89.259262, 12.222222]]
points = np.array(points)
vor = Voronoi(points)
regions, vertices = voronoi_finite_polygons_2d(vor)
pts = MultiPoint([Point(i) for i in points])
mask = pts.convex_hull
new_vertices = []
for region in regions:
polygon = vertices[region]
shape = list(polygon.shape)
shape[0] += 1
p = Polygon(np.append(polygon, polygon[0]).reshape(*shape)).intersection(mask)
poly = np.array(list(zip(p.boundary.coords.xy[0][:-1], p.boundary.coords.xy[1][:-1])))
new_vertices.append(poly)
plt.fill(*zip(*poly), alpha=0.4)
plt.plot(points[:,0], points[:,1], 'ko')
plt.title("Clipped Voronois")
plt.show()
更一般地说（即不使用 voronoi_finite_polygons_2d 但直接使用 Voronoi 的输出，如果它符合我的需要），我会这样做：
import numpy as np
import matplotlib.pyplot as plt
from shapely.ops import polygonize,unary_union
from shapely.geometry import LineString, MultiPolygon, MultiPoint, Point
from scipy.spatial import Voronoi
points = [[-30.0, 30.370371], [-27.777777, 35.925926], [-34.444443, 58.51852], [-2.9629631, 57.777779], [-17.777779, 75.185181], [-29.25926, 58.148151], [-11.111112, 33.703705], [-11.481482, 40.0], [-27.037037, 40.0], [-7.7777777, 94.444443], [-2.2222223, 122.22222], [-20.370371, 106.66667], [1.1111112, 125.18518], [-6.2962961, 128.88889], [6.666667, 133.7037], [11.851852, 136.2963], [8.5185184, 140.74074], [20.370371, 92.962959], [17.777779, 114.81482], [12.962962, 97.037041], [13.333334, 127.77778], [22.592592, 120.37037], [16.296295, 127.77778], [11.851852, 50.740742], [20.370371, 54.814816], [19.25926, 47.40741], [32.59259, 122.96296], [20.74074, 130.0], [24.814816, 84.814819], [26.296295, 91.111107], [56.296295, 131.48149], [60.0, 141.85185], [32.222221, 136.66667], [53.703705, 147.03703], [87.40741, 196.2963], [34.074074, 159.62964], [34.444443, -2.5925925], [36.666668, -1.8518518], [34.074074, -7.4074073], [35.555557, -18.888889], [76.666664, -39.629627], [35.185184, -37.777779], [25.185184, 14.074074], [42.962959, 32.962963], [35.925926, 9.2592592], [52.222221, 77.777779], [57.777779, 92.222221], [47.037041, 92.59259], [82.222221, 54.074074], [48.888889, 24.444445], [35.925926, 47.777779], [50.740742, 69.259254], [51.111111, 51.851849], [56.666664, -12.222222], [117.40741, -4.4444447], [59.629631, -5.9259262], [66.666664, 134.07408], [91.481483, 127.40741], [66.666664, 141.48149], [53.703705, 4.0740738], [85.185181, 11.851852], [69.629631, 0.37037039], [68.518517, 99.259262], [75.185181, 100.0], [70.370369, 113.7037], [74.444443, 82.59259], [82.222221, 93.703697], [72.222221, 84.444443], [77.777779, 167.03703], [88.888893, 168.88889], [73.703705, 178.88889], [87.037041, 123.7037], [78.518517, 97.037041], [95.555557, 52.962959], [85.555557, 57.037041], [90.370369, 23.333332], [100.0, 28.51852], [88.888893, 37.037037], [87.037041, -42.962959], [89.259262, -24.814816], [93.333328, 7.4074073], [98.518517, 5.185185], [92.59259, 1.4814816], [85.925919, 153.7037], [95.555557, 154.44444], [92.962959, 150.0], [97.037041, 95.925919], [106.66667, 115.55556], [92.962959, 114.81482], [108.88889, 56.296295], [97.777779, 50.740742], [94.074081, 89.259262], [96.666672, 91.851852], [102.22222, 77.777779], [107.40741, 40.370369], [105.92592, 29.629629], [105.55556, -46.296295], [118.51852, -47.777779], [112.22222, -43.333336], [112.59259, 25.185184], [115.92592, 27.777777], [112.59259, 31.851852], [107.03704, -36.666668], [118.88889, -32.59259], [114.07408, -25.555555], [115.92592, 85.185181], [105.92592, 18.888889], [121.11111, 14.444445], [129.25926, -28.51852], [127.03704, -18.518518], [139.25926, -12.222222], [141.48149, 3.7037036], [137.03703, -4.814815], [153.7037, -26.666668], [-2.2222223, 5.5555558], [0.0, 9.6296301], [10.74074, 20.74074], [2.2222223, 54.074074], [4.0740738, 50.740742], [34.444443, 46.296295], [11.481482, 1.4814816], [24.074076, -2.9629631], [74.814819, 79.259254], [67.777779, 152.22223], [57.037041, 127.03704], [89.259262, 12.222222]]
points = np.array(points)
vor = Voronoi(points)
lines = [
LineString(vor.vertices[line])
for line in vor.ridge_vertices if -1 not in line
]
convex_hull = MultiPoint([Point(i) for i in points]).convex_hull.buffer(2)
result = MultiPolygon(
[poly.intersection(convex_hull) for poly in polygonize(lines)])
result = MultiPolygon(
[p for p in result]
+ [p for p in convex_hull.difference(unary_union(result))])
plt.plot(points[:,0], points[:,1], 'ko')
for r in result:
plt.fill(*zip(*np.array(list(
zip(r.boundary.coords.xy[0][:-1], r.boundary.coords.xy[1][:-1])))),
alpha=0.4)
plt.show()
减去凸包上的小缓冲区，结果看起来应该是一样的：
或者，如果您想要的结果在外观上略低于 "raw"，您可以尝试使用缓冲方法（及其 resolution/join_style/cap_style 属性）你的点（and/or 凸包的缓冲区）：
pts = MultiPoint([Point(i) for i in points])
mask = pts.convex_hull.union(pts.buffer(10, resolution=5, cap_style=3))
result = MultiPolygon(
[poly.intersection(mask) for poly in polygonize(lines)])
然后得到类似的东西（你可以取得更好的..！）：
从 mgc 扩展上面的有用答案，并再次使用 voronoi_finite_polygons_2d，这是将 Voronoi 镶嵌切割成任意形状的解决方案（此处来自二进制掩码）。这里唯一的额外工作是从你的面具制作一个多边形。我确信还有其他（可能更好）方法可以像这样对蒙版进行多边形化，但这对我的目的有用。
import matplotlib.pyplot as plt
import numpy as np
from scipy.ndimage.morphology import binary_erosion
from scipy.spatial import Voronoi
from shapely.geometry import Point, Polygon
from skimage import draw
from sklearn.neighbors import KDTree
def get_circular_se(radius=2):
N = (radius * 2) + 1
se = np.zeros(shape=[N,N])
for i in range(N):
for j in range(N):
se[i,j] = (i - N / 2)**2 + (j - N / 2)**2 <= radius**2
se = np.array(se, dtype="uint8")
return se
def polygonize_by_nearest_neighbor(pp):
"""Takes a set of xy coordinates pp Numpy array(n,2) and reorders the array to make
a polygon using a nearest neighbor approach.
"""
# start with first index
pp_new = np.zeros_like(pp)
pp_new[0] = pp[0]
p_current_idx = 0
tree = KDTree(pp)
for i in range(len(pp) - 1):
nearest_dist, nearest_idx = tree.query([pp[p_current_idx]], k=4) # k1 = identity
nearest_idx = nearest_idx[0]
# finds next nearest point along the contour and adds it
for min_idx in nearest_idx[1:]: # skip the first point (will be zero for same pixel)
if not pp[min_idx].tolist() in pp_new.tolist(): # make sure it's not already in the list
pp_new[i + 1] = pp[min_idx]
p_current_idx = min_idx
break
pp_new[-1] = pp[0]
return pp_new
#generates a circular mask
side_len = 512
rad = 100
mask = np.zeros(shape=(side_len, side_len))
rr, cc = draw.circle(side_len/2, side_len/2, radius=rad, shape=mask.shape)
mask[rr, cc] = 1
#makes a polygon from the mask perimeter
se = get_circular_se(radius=1)
contour = mask - binary_erosion(mask, structure=se)
pixels_mask = np.array(np.where(contour==1)[::-1]).T
polygon = polygonize_by_nearest_neighbor(pixels_mask)
polygon = Polygon(polygon)
#generates random seeds
points_x = np.random.random_integers(0,side_len,250)
points_y = np.random.random_integers(0,side_len,250)
points = (np.vstack((points_x,points_y))).T
# returns a list of the centroids that are contained within the polygon
new_points = []
for point in points:
if polygon.contains(Point(point)):
new_points.append(point)
#performs voronoi tesselation
if len(points) > 3: #otherwise the tesselation won't work
vor = Voronoi(new_points)
regions, vertices = voronoi_finite_polygons_2d(vor)
#clips tesselation to the mask
new_vertices = []
for region in regions:
poly_reg = vertices[region]
shape = list(poly_reg.shape)
shape[0] += 1
p = Polygon(np.append(poly_reg, poly_reg[0]).reshape(*shape)).intersection(polygon)
poly = (np.array(p.exterior.coords)).tolist()
new_vertices.append(poly)
#plots the results
fig, ax = plt.subplots()
ax.imshow(mask,cmap='Greys_r')
for poly in new_vertices:
ax.fill(*zip(*poly), alpha=0.7)
ax.plot(points[:,0],points[:,1],'ro',ms=2)
plt.show()