PyGraphviz 只是没有安装在 OS-X 10.9.4 中

Question

注意：此问题未包含在以下任何帖子中：1, 2, 。

目的是安装 PyGraphviz 以使用 python-weka-wrapper 提供的可视化工具。我只是无法安装 PyGraphviz。以下是我从 pip

尝试时得到的错误

$ sudo pip install git+git://github.com/pygraphviz/pygraphviz.git
Password:
The directory '/Users/Ebe/Library/Caches/pip/http' or its parent directory is not owned by the current user and the cache has been disabled. Please check the permissions and owner of that directory. If executing pip with sudo, you may want sudo's -H flag.
The directory '/Users/Ebe/Library/Caches/pip' or its parent directory is not owned by the current user and caching wheels has been disabled. check the permissions and owner of that directory. If executing pip with sudo, you may want sudo's -H flag.
Collecting git+git://github.com/pygraphviz/pygraphviz.git
  Cloning git://github.com/pygraphviz/pygraphviz.git to /tmp/pip-rMp2aK-build
Installing collected packages: pygraphviz
  Running setup.py install for pygraphviz ... error
    Complete output from command /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python -u -c "import setuptools, tokenize;__file__='/tmp/pip-rMp2aK-build/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-CrnqPI-record/install-record.txt --single-version-externally-managed --compile:
    /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/setuptools/dist.py:282: UserWarning: Normalizing '1.4.dev' to '1.4.dev0'
      normalized_version,
    running install
    Trying pkg-config
    include_dirs=/opt/local/include/graphviz
    library_dirs=/opt/local/lib
    running build
    running build_py
    creating build
    creating build/lib.macosx-10.9-x86_64-2.7
    creating build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    copying pygraphviz/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    copying pygraphviz/agraph.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    copying pygraphviz/graphviz.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    copying pygraphviz/release.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    copying pygraphviz/version.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    creating build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_attribute_defaults.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_attributes.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_clear.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_drawing.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_edge_attributes.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_graph.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_html.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_layout.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_node_attributes.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_readwrite.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_string.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_subgraph.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    copying pygraphviz/tests/test_unicode.py -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz/tests
    running egg_info
    creating pygraphviz.egg-info
    writing pygraphviz.egg-info/PKG-INFO
    writing top-level names to pygraphviz.egg-info/top_level.txt
    writing dependency_links to pygraphviz.egg-info/dependency_links.txt
    writing manifest file 'pygraphviz.egg-info/SOURCES.txt'
    warning: manifest_maker: standard file '-c' not found

    reading manifest file 'pygraphviz.egg-info/SOURCES.txt'
    reading manifest template 'MANIFEST.in'
    warning: no previously-included files matching '*~' found anywhere in distribution
    warning: no previously-included files matching '*.pyc' found anywhere in distribution
    warning: no previously-included files matching '.svn' found anywhere in distribution
    no previously-included directories found matching 'doc/build'
    writing manifest file 'pygraphviz.egg-info/SOURCES.txt'
    copying pygraphviz/graphviz.i -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    copying pygraphviz/graphviz_wrap.c -> build/lib.macosx-10.9-x86_64-2.7/pygraphviz
    running build_ext
    building 'pygraphviz._graphviz' extension
    creating build/temp.macosx-10.9-x86_64-2.7
    creating build/temp.macosx-10.9-x86_64-2.7/pygraphviz
    /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/opt/local/include/graphviz -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c pygraphviz/graphviz_wrap.c -o build/temp.macosx-10.9-x86_64-2.7/pygraphviz/graphviz_wrap.o
    pygraphviz/graphviz_wrap.c:2987:10: fatal error: 'graphviz/cgraph.h' file not found
    #include "graphviz/cgraph.h"
             ^
    1 error generated.
    error: command '/usr/bin/clang' failed with exit status 1

    ----------------------------------------
Command "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python -u -c "import setuptools, tokenize;__file__='/tmp/pip-rMp2aK-build/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-CrnqPI-record/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-rMp2aK-build/

Graphviz 是在 MacPorts 的帮助下安装的。在上面的结果中它的路径很清楚

include_dirs=/opt/local/include/graphviz
library_dirs=/opt/local/lib

graphviz/cgraph.h 也存在。那么安装有什么问题呢

我尝试了网上的所有方法，但似乎没有任何效果。这是我尝试过的完整列表。

从 git 安装：

sudo pip install git+git://github.com/pygraphviz/pygraphviz.git
从 setup.py 安装包来源：

sudo python setup.py install
沿 win 命令行使用包含和库路径安装：

sudo python setup.py install --include-path=/opt/local/include/graphviz --library-path=/opt/local/lib/graphviz

它们中的每一个都抛出相同的错误。

我该怎么办？

Answer 1

尝试改用：include_dirs=/opt/local/include

Answer 2

这对我来说很好用：

pip install --global-option=build_ext --global-option="-I/opt/local/include/" --global-option="-L/opt/local/lib" PyGraphviz

参考：python pip specify a library directory and an include directory

Answer 3

这对我来说很好用：

pip install --install-option="--include-path=/usr/local/include/" --install-option="--library-path=/usr/local/lib/" pygraphviz

参考：PyGraphvizをmacOSにインストールする

PyGraphviz 只是没有安装在 OS-X 10.9.4 中

PyGraphviz is just not getting installed in OS-X 10.9.4

python

macos

installation

package

pygraphviz