R error: version `GCC_4.3.0' not found?
R error: version `GCC_4.3.0' not found?
从昨天开始,我就在 Ubuntu 上与 R 中的错误作斗争,这使得它几乎无法运行:
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/lib/R/library/stats/libs/stats.so':
/usr/local/lib/libgcc_s.so.1: version `GCC_4.3.0' not found (required by
/usr/lib/x86_64-linux-gnu/libgfortran.so.3)
GCC 已安装并正常运行:
xxx@xxx:~$ gcc -v
Using built-in specs.
COLLECT_GCC=/usr/bin/gcc-5.real
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.1-2ubuntu1~16.04' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 5.4.1 20160904 (Ubuntu 5.4.1-2ubuntu1~16.04)
清除并重新安装 r-base r-core
等以及 libgfortran3
使用 apt
没有帮助。
我还尝试从源代码重建 R。 make
导致似乎已连接的错误:
installing 'sysdata.rda'
/root/R-3.3.1/bin/exec/R: /usr/local/lib/libgomp.so.1: version `GOMP_4.0' not found (required by /root/R-3.3.1/bin/exec/R)
/root/R-3.3.1/bin/exec/R: /usr/local/lib/libm.so.6: version `GLIBC_2.23' not found (required by /root/R-3.3.1/bin/exec/R)
../../../share/make/basepkg.mk:150: recipe for target 'sysdata' failed
如有任何帮助,我将不胜感激。提前谢谢你。
我设法使用 locate
和 cp
解决了问题。我想结果是库 /usr/local/lib/libgomp.so.1
、/usr/local/lib/libm.so.6
和 /usr/local/lib/libgcc_s.so.1
不知何故被破坏了。
我从使用 locate
找到的其他位置复制了库并重新安装了 R。
一切恢复正常。谢谢!
从昨天开始,我就在 Ubuntu 上与 R 中的错误作斗争,这使得它几乎无法运行:
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/lib/R/library/stats/libs/stats.so':
/usr/local/lib/libgcc_s.so.1: version `GCC_4.3.0' not found (required by
/usr/lib/x86_64-linux-gnu/libgfortran.so.3)
GCC 已安装并正常运行:
xxx@xxx:~$ gcc -v
Using built-in specs.
COLLECT_GCC=/usr/bin/gcc-5.real
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.1-2ubuntu1~16.04' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 5.4.1 20160904 (Ubuntu 5.4.1-2ubuntu1~16.04)
清除并重新安装 r-base r-core
等以及 libgfortran3
使用 apt
没有帮助。
我还尝试从源代码重建 R。 make
导致似乎已连接的错误:
installing 'sysdata.rda'
/root/R-3.3.1/bin/exec/R: /usr/local/lib/libgomp.so.1: version `GOMP_4.0' not found (required by /root/R-3.3.1/bin/exec/R)
/root/R-3.3.1/bin/exec/R: /usr/local/lib/libm.so.6: version `GLIBC_2.23' not found (required by /root/R-3.3.1/bin/exec/R)
../../../share/make/basepkg.mk:150: recipe for target 'sysdata' failed
如有任何帮助,我将不胜感激。提前谢谢你。
我设法使用 locate
和 cp
解决了问题。我想结果是库 /usr/local/lib/libgomp.so.1
、/usr/local/lib/libm.so.6
和 /usr/local/lib/libgcc_s.so.1
不知何故被破坏了。
我从使用 locate
找到的其他位置复制了库并重新安装了 R。
一切恢复正常。谢谢!