geom_curve - 绘制零以上的所有曲线

Question

我正在尝试使用 ggplot2 的 geom_curve:

制作类似于 arcdiagram 包的圆弧图

library(ggplot2)

ggplot(myDat, aes(x = A, xend = B, y = 0, yend = 0)) +
  geom_curve(alpha = 0.2, curvature = 1, ncp = 1000, lineend = 'butt')

有些曲线低于 0，如何让它们都高于 Y = 0？

数据：

myDat <- 
  structure(list(A = c(36047276L, 36074979L, 36074979L, 36074979L, 
                       36074979L, 36074979L, 36074979L, 36074979L, 36074979L, 36074979L, 
                       36074979L, 36077099L, 36077099L, 36077099L, 36077099L, 36077099L, 
                       36077099L, 36077099L, 36077099L, 36098040L, 36098040L, 36098040L, 
                       36098040L, 36098040L, 36098040L, 36098040L, 36098040L, 36098040L, 
                       36098040L, 36098040L, 36098040L, 36098040L, 36098040L, 36098040L, 
                       36098040L, 36098040L, 36099840L, 36099840L, 36099840L, 36099840L, 
                       36099840L, 36099840L, 36099840L, 36099840L, 36099840L, 36099840L, 
                       36099840L, 36099840L, 36099840L, 36099840L, 36099840L, 36099840L, 
                       36099840L, 36101586L, 36101586L, 36101586L, 36101586L, 36101586L, 
                       36101586L, 36101586L, 36101586L, 36101586L, 36101586L, 36101586L, 
                       36101586L, 36101586L, 36101586L, 36101586L, 36101586L, 36101586L, 
                       36103565L, 36103565L, 36103565L, 36103565L, 36103565L, 36103565L, 
                       36103565L, 36103565L, 36103565L, 36103565L, 36103565L, 36103565L, 
                       36103565L, 36103565L, 36103565L, 36103565L, 36103565L),
                 B = c(36047417L, 
                       36077099L, 36077279L, 36077863L, 36078510L, 36079111L, 36079565L, 
                       36080165L, 36080428L, 36082473L, 36082907L, 36074979L, 36077279L, 
                       36077863L, 36078510L, 36079111L, 36079565L, 36080165L, 36082907L, 
                       36096300L, 36097775L, 36098987L, 36099840L, 36099952L, 36100767L, 
                       36101156L, 36101586L, 36101633L, 36101926L, 36102035L, 36102381L, 
                       36102833L, 36103149L, 36103565L, 36103872L, 36104121L, 36096300L, 
                       36097775L, 36098040L, 36098987L, 36099952L, 36100767L, 36101156L, 
                       36101586L, 36101633L, 36101926L, 36102035L, 36102381L, 36102833L, 
                       36103149L, 36103565L, 36103872L, 36104121L, 36096300L, 36097775L, 
                       36098040L, 36098987L, 36099840L, 36099952L, 36100767L, 36101156L, 
                       36101633L, 36101926L, 36102035L, 36102381L, 36102833L, 36103149L, 
                       36103565L, 36103872L, 36104121L, 36096300L, 36097775L, 36098040L, 
                       36098987L, 36099840L, 36099952L, 36100767L, 36101156L, 36101586L, 
                       36101633L, 36101926L, 36102035L, 36102381L, 36102833L, 36103149L, 
                       36103872L, 36104121L)), .Names = c("A", "B"),
            class = "data.frame", row.names = c(NA, -87L))

Answer 1

基于curvature曲线将向左或向右弯曲。这意味着在这种情况下，当曲线从 A 绘制到 B 且曲率为 1 时，它将向右弯曲。因此，如果 A 小于 B，则曲线将为 'negative'（在 y 轴下方），如果 A 大于 B，则为正值。

使所有曲线都在同一侧的一种方法是使用两个 geom_curve，每种情况一个：

ggplot(mapping = aes(x = A, xend = B, y = 0, yend = 0)) +
  geom_curve(data = subset(myDat, A > B),
             alpha = 0.2, curvature = 1, ncp = 1000, lineend = 'butt') +
  geom_curve(data = subset(myDat, A < B),
             alpha = 0.2, curvature = -1, ncp = 1000, lineend = 'butt')

或者，当它们以错误的方式对齐时，我们可以交换它们：

myDat2 <- myDat
myDat2$A <- pmax(myDat$A, myDat$B) 
myDat2$B <- pmin(myDat$A, myDat$B)

ggplot(myDat2, aes(x = A, xend = B, y = 0, yend = 0)) +
  geom_curve(alpha = 0.2, curvature = 1, ncp = 1000, lineend = 'butt')

两者都导致：

geom_curve - 绘制零以上的所有曲线

geom_curve - plot all curves above zero

r

ggplot2

arc-diagram