YARN 集群上的问题 运行 Apache Giraph (Hadoop 2.5.2)
Trouble running Apache Giraph on YARN cluster (Hadoop 2.5.2)
我正在尝试 运行 在 Hadoop 2.5.2 上使用 Giraph 1.1 的基本 ShortestPaths 示例。我 运行 正在使用实际的集群模型(例如,不是伪分布式),我可以 运行 标准 mapreduce 作业。但是当我尝试 运行 Giraph 示例时,它似乎挂起,除非我设置
-ca giraph.SplitMasterWorker=false
并相应地将 worker 数量设置为 1。但这有点违背 运行ning 在集群上的意义,不是吗? OTOH,如果我 运行 没有禁用 SplitMasterWorker,我会得到这个错误:
When using LocalJobRunner, you cannot run in split master / worker mode
since there is only 1 task at a time!
这表明 Girpah 默认为本地模式。我读过的一份报告建议通过添加
来解决这个问题
-ca mapred.job.tracker=10.0.0.12:5431
到 Girpah 命令行,但是在带有 YARN 的 Hadoop 2.5.2 上,如果我理解正确的话,端口 5431 上没有 JobTracker。无论如何,如果我确实添加了那个位,作业 会尝试 到 运行,但似乎没有完成就挂起。这是完整的命令行,作业输出如下:
[prhodes@ip-10-0-0-12 conf]$ hadoop jar /home/prhodes/giraph/giraph-
examples/target/giraph-examples-1.2.0-SNAPSHOT-for-hadoop-2.5.2-jar-with-
dependencies.jar org.apache.giraph.GiraphRunner
org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
-vip /user/prhodes/input/tiny_graph.txt -vof
org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op
/user/prhodes/giraph_output/shortestpaths -w 3 -ca
mapred.job.tracker=10.0.0.12:5431
15/03/10 03:18:59 INFO utils.ConfigurationUtils: No edge input format specified. Ensure your InputFormat does not require one.
15/03/10 03:19:02 INFO server.NIOServerCnxnFactory: binding to port 0.0.0.0/0.0.0.0:22181
15/03/10 03:19:02 INFO server.PrepRequestProcessor: zookeeper.skipACL=="yes", ACL checks will be skipped
15/03/10 03:19:05 INFO zk.ZooKeeperManager: onlineZooKeeperServers: Connect attempt 1 of 10 max trying to connect to ip-10-0-0-12.ec2.internal:22181 with poll msecs = 3000
15/03/10 03:19:05 INFO zk.ZooKeeperManager: onlineZooKeeperServers: Connected to ip-10-0-0-12.ec2.internal/10.0.0.12:22181!
15/03/10 03:19:05 INFO zk.ZooKeeperManager: onlineZooKeeperServers: Creating my filestamp _bsp/_defaultZkManagerDir/job_local1346154675_0001/_zkServer/ip-10-0-0-12.ec2.internal 0
15/03/10 03:19:05 INFO server.NIOServerCnxnFactory: Accepted socket connection from /10.0.0.12:45182
15/03/10 03:19:05 INFO graph.GraphTaskManager: setup: Chosen to run ZooKeeper...
15/03/10 03:19:05 INFO graph.GraphTaskManager: setup: Starting up BspServiceMaster (master thread)...
15/03/10 03:19:05 INFO bsp.BspService: BspService: Path to create to halt is /_hadoopBsp/job_local1346154675_0001/_haltComputation
15/03/10 03:19:05 INFO bsp.BspService: BspService: Connecting to ZooKeeper with job job_local1346154675_0001, 0 on ip-10-0-0-12.ec2.internal:22181
15/03/10 03:19:05 INFO zookeeper.ClientCnxn: Opening socket connection to server ip-10-0-0-12.ec2.internal/10.0.0.12:22181. Will not attempt to authenticate using SASL (unknown error)
15/03/10 03:19:05 INFO server.NIOServerCnxnFactory: Accepted socket connection from /10.0.0.12:45183
15/03/10 03:19:05 INFO zookeeper.ClientCnxn: Socket connection established to ip-10-0-0-12.ec2.internal/10.0.0.12:22181, initiating session
15/03/10 03:19:05 INFO server.ZooKeeperServer: Client attempting to establish new session at /10.0.0.12:45183
15/03/10 03:19:05 INFO persistence.FileTxnLog: Creating new log file: log.1
15/03/10 03:19:05 INFO server.ZooKeeperServer: Established session 0x14c01b158f00000 with negotiated timeout 600000 for client /10.0.0.12:45183
15/03/10 03:19:05 INFO zookeeper.ClientCnxn: Session establishment complete on server ip-10-0-0-12.ec2.internal/10.0.0.12:22181, sessionid = 0x14c01b158f00000, negotiated timeout = 600000
15/03/10 03:19:05 INFO bsp.BspService: process: Asynchronous connection complete.
15/03/10 03:19:05 INFO graph.GraphTaskManager: map: No need to do anything when not a worker
15/03/10 03:19:05 INFO graph.GraphTaskManager: cleanup: Starting for MASTER_ZOOKEEPER_ONLY
15/03/10 03:19:05 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x1 zxid:0x2 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_masterElectionDir Error:KeeperErrorCode = NoNode for /_hadoopBsp/job_local1346154675_0001/_masterElectionDir
15/03/10 03:19:05 INFO master.BspServiceMaster: becomeMaster: First child is '/_hadoopBsp/job_local1346154675_0001/_masterElectionDir/ip-10-0-0-12.ec2.internal_00000000000' and my bid is '/_hadoopBsp/job_local1346154675_0001/_masterElectionDir/ip-10-0-0-12.ec2.internal_00000000000'
15/03/10 03:19:05 INFO netty.NettyServer: NettyServer: Using execution group with 8 threads for requestFrameDecoder.
15/03/10 03:19:05 INFO Configuration.deprecation: mapred.map.tasks is deprecated. Instead, use mapreduce.job.maps
15/03/10 03:19:05 INFO netty.NettyServer: start: Started server communication server: ip-10-0-0-12.ec2.internal/10.0.0.12:30000 with up to 16 threads on bind attempt 0 with sendBufferSize = 32768 receiveBufferSize = 524288
15/03/10 03:19:05 INFO netty.NettyClient: NettyClient: Using execution handler with 8 threads after request-encoder.
15/03/10 03:19:05 INFO master.BspServiceMaster: becomeMaster: I am now the master!
15/03/10 03:19:05 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0xe zxid:0x9 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0 Error:KeeperErrorCode = NoNode for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0
15/03/10 03:19:05 INFO bsp.BspService: process: applicationAttemptChanged signaled
15/03/10 03:19:05 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x16 zxid:0xc txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1 Error:KeeperErrorCode = NoNode for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1
15/03/10 03:19:05 WARN bsp.BspService: process: Unknown and unprocessed event (path=/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir, type=NodeChildrenChanged, state=SyncConnected)
15/03/10 03:19:07 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:07 INFO job.HaltApplicationUtils$DefaultHaltInstructionsWriter: writeHaltInstructions: To halt after next superstep execute: 'bin/halt-application --zkServer ip-10-0-0-12.ec2.internal:22181 --zkNode /_hadoopBsp/job_local1346154675_0001/_haltComputation'
15/03/10 03:19:07 INFO mapreduce.Job: Running job: job_local1346154675_0001
15/03/10 03:19:08 INFO mapreduce.Job: Job job_local1346154675_0001 running in uber mode : false
15/03/10 03:19:08 INFO mapreduce.Job: map 25% reduce 0%
15/03/10 03:19:10 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:19 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:28 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:35 INFO master.BspServiceMaster: checkWorkers: Only found 0 responses of 3 needed to start superstep -1. Reporting every 30000 msecs, 569976 more msecs left before giving up.
15/03/10 03:19:35 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x22 zxid:0x10 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerHealthyDir Error:KeeperErrorCode = NodeExists for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerHealthyDir
15/03/10 03:19:35 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x23 zxid:0x11 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerUnhealthyDir Error:KeeperErrorCode = NodeExists for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerUnhealthyDir
15/03/10 03:19:40 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
好的,事实证明这很简单。我使用 hadoop_2 配置文件构建 Giraph,而不是 hadoop_yarn。当我使用 yarn profile 构建它时,这不再发生。我不明白这是如何工作的整个机制,但显然使用该配置文件构建会更改一些默认值,从而在运行时将其置于纯 YARN 模式。
所以,如果你得到这个,重建使用
mvn -Phadoop_yarn clean package
这可能会解决问题。
我正在尝试 运行 在 Hadoop 2.5.2 上使用 Giraph 1.1 的基本 ShortestPaths 示例。我 运行 正在使用实际的集群模型(例如,不是伪分布式),我可以 运行 标准 mapreduce 作业。但是当我尝试 运行 Giraph 示例时,它似乎挂起,除非我设置
-ca giraph.SplitMasterWorker=false
并相应地将 worker 数量设置为 1。但这有点违背 运行ning 在集群上的意义,不是吗? OTOH,如果我 运行 没有禁用 SplitMasterWorker,我会得到这个错误:
When using LocalJobRunner, you cannot run in split master / worker mode
since there is only 1 task at a time!
这表明 Girpah 默认为本地模式。我读过的一份报告建议通过添加
来解决这个问题-ca mapred.job.tracker=10.0.0.12:5431
到 Girpah 命令行,但是在带有 YARN 的 Hadoop 2.5.2 上,如果我理解正确的话,端口 5431 上没有 JobTracker。无论如何,如果我确实添加了那个位,作业 会尝试 到 运行,但似乎没有完成就挂起。这是完整的命令行,作业输出如下:
[prhodes@ip-10-0-0-12 conf]$ hadoop jar /home/prhodes/giraph/giraph-
examples/target/giraph-examples-1.2.0-SNAPSHOT-for-hadoop-2.5.2-jar-with-
dependencies.jar org.apache.giraph.GiraphRunner
org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
-vip /user/prhodes/input/tiny_graph.txt -vof
org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op
/user/prhodes/giraph_output/shortestpaths -w 3 -ca
mapred.job.tracker=10.0.0.12:5431
15/03/10 03:18:59 INFO utils.ConfigurationUtils: No edge input format specified. Ensure your InputFormat does not require one.
15/03/10 03:19:02 INFO server.NIOServerCnxnFactory: binding to port 0.0.0.0/0.0.0.0:22181
15/03/10 03:19:02 INFO server.PrepRequestProcessor: zookeeper.skipACL=="yes", ACL checks will be skipped
15/03/10 03:19:05 INFO zk.ZooKeeperManager: onlineZooKeeperServers: Connect attempt 1 of 10 max trying to connect to ip-10-0-0-12.ec2.internal:22181 with poll msecs = 3000
15/03/10 03:19:05 INFO zk.ZooKeeperManager: onlineZooKeeperServers: Connected to ip-10-0-0-12.ec2.internal/10.0.0.12:22181!
15/03/10 03:19:05 INFO zk.ZooKeeperManager: onlineZooKeeperServers: Creating my filestamp _bsp/_defaultZkManagerDir/job_local1346154675_0001/_zkServer/ip-10-0-0-12.ec2.internal 0
15/03/10 03:19:05 INFO server.NIOServerCnxnFactory: Accepted socket connection from /10.0.0.12:45182
15/03/10 03:19:05 INFO graph.GraphTaskManager: setup: Chosen to run ZooKeeper...
15/03/10 03:19:05 INFO graph.GraphTaskManager: setup: Starting up BspServiceMaster (master thread)...
15/03/10 03:19:05 INFO bsp.BspService: BspService: Path to create to halt is /_hadoopBsp/job_local1346154675_0001/_haltComputation
15/03/10 03:19:05 INFO bsp.BspService: BspService: Connecting to ZooKeeper with job job_local1346154675_0001, 0 on ip-10-0-0-12.ec2.internal:22181
15/03/10 03:19:05 INFO zookeeper.ClientCnxn: Opening socket connection to server ip-10-0-0-12.ec2.internal/10.0.0.12:22181. Will not attempt to authenticate using SASL (unknown error)
15/03/10 03:19:05 INFO server.NIOServerCnxnFactory: Accepted socket connection from /10.0.0.12:45183
15/03/10 03:19:05 INFO zookeeper.ClientCnxn: Socket connection established to ip-10-0-0-12.ec2.internal/10.0.0.12:22181, initiating session
15/03/10 03:19:05 INFO server.ZooKeeperServer: Client attempting to establish new session at /10.0.0.12:45183
15/03/10 03:19:05 INFO persistence.FileTxnLog: Creating new log file: log.1
15/03/10 03:19:05 INFO server.ZooKeeperServer: Established session 0x14c01b158f00000 with negotiated timeout 600000 for client /10.0.0.12:45183
15/03/10 03:19:05 INFO zookeeper.ClientCnxn: Session establishment complete on server ip-10-0-0-12.ec2.internal/10.0.0.12:22181, sessionid = 0x14c01b158f00000, negotiated timeout = 600000
15/03/10 03:19:05 INFO bsp.BspService: process: Asynchronous connection complete.
15/03/10 03:19:05 INFO graph.GraphTaskManager: map: No need to do anything when not a worker
15/03/10 03:19:05 INFO graph.GraphTaskManager: cleanup: Starting for MASTER_ZOOKEEPER_ONLY
15/03/10 03:19:05 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x1 zxid:0x2 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_masterElectionDir Error:KeeperErrorCode = NoNode for /_hadoopBsp/job_local1346154675_0001/_masterElectionDir
15/03/10 03:19:05 INFO master.BspServiceMaster: becomeMaster: First child is '/_hadoopBsp/job_local1346154675_0001/_masterElectionDir/ip-10-0-0-12.ec2.internal_00000000000' and my bid is '/_hadoopBsp/job_local1346154675_0001/_masterElectionDir/ip-10-0-0-12.ec2.internal_00000000000'
15/03/10 03:19:05 INFO netty.NettyServer: NettyServer: Using execution group with 8 threads for requestFrameDecoder.
15/03/10 03:19:05 INFO Configuration.deprecation: mapred.map.tasks is deprecated. Instead, use mapreduce.job.maps
15/03/10 03:19:05 INFO netty.NettyServer: start: Started server communication server: ip-10-0-0-12.ec2.internal/10.0.0.12:30000 with up to 16 threads on bind attempt 0 with sendBufferSize = 32768 receiveBufferSize = 524288
15/03/10 03:19:05 INFO netty.NettyClient: NettyClient: Using execution handler with 8 threads after request-encoder.
15/03/10 03:19:05 INFO master.BspServiceMaster: becomeMaster: I am now the master!
15/03/10 03:19:05 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0xe zxid:0x9 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0 Error:KeeperErrorCode = NoNode for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0
15/03/10 03:19:05 INFO bsp.BspService: process: applicationAttemptChanged signaled
15/03/10 03:19:05 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x16 zxid:0xc txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1 Error:KeeperErrorCode = NoNode for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1
15/03/10 03:19:05 WARN bsp.BspService: process: Unknown and unprocessed event (path=/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir, type=NodeChildrenChanged, state=SyncConnected)
15/03/10 03:19:07 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:07 INFO job.HaltApplicationUtils$DefaultHaltInstructionsWriter: writeHaltInstructions: To halt after next superstep execute: 'bin/halt-application --zkServer ip-10-0-0-12.ec2.internal:22181 --zkNode /_hadoopBsp/job_local1346154675_0001/_haltComputation'
15/03/10 03:19:07 INFO mapreduce.Job: Running job: job_local1346154675_0001
15/03/10 03:19:08 INFO mapreduce.Job: Job job_local1346154675_0001 running in uber mode : false
15/03/10 03:19:08 INFO mapreduce.Job: map 25% reduce 0%
15/03/10 03:19:10 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:19 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:28 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
15/03/10 03:19:35 INFO master.BspServiceMaster: checkWorkers: Only found 0 responses of 3 needed to start superstep -1. Reporting every 30000 msecs, 569976 more msecs left before giving up.
15/03/10 03:19:35 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x22 zxid:0x10 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerHealthyDir Error:KeeperErrorCode = NodeExists for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerHealthyDir
15/03/10 03:19:35 INFO server.PrepRequestProcessor: Got user-level KeeperException when processing sessionid:0x14c01b158f00000 type:create cxid:0x23 zxid:0x11 txntype:-1 reqpath:n/a Error Path:/_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerUnhealthyDir Error:KeeperErrorCode = NodeExists for /_hadoopBsp/job_local1346154675_0001/_applicationAttemptsDir/0/_superstepDir/-1/_workerUnhealthyDir
15/03/10 03:19:40 INFO mapred.LocalJobRunner: MASTER_ZOOKEEPER_ONLY checkWorkers: Only found 0 responses of 3 needed to start superstep -1 > map
好的,事实证明这很简单。我使用 hadoop_2 配置文件构建 Giraph,而不是 hadoop_yarn。当我使用 yarn profile 构建它时,这不再发生。我不明白这是如何工作的整个机制,但显然使用该配置文件构建会更改一些默认值,从而在运行时将其置于纯 YARN 模式。
所以,如果你得到这个,重建使用
mvn -Phadoop_yarn clean package
这可能会解决问题。