knitr 最小示例不显示数字

Question

我有问题运行 knitr rnw Rstudio 中的最小示例。我从 his github

得到了以下最小示例

%% LyX 2.2.1 created this file.  For more info, see http://www.lyx.org/.
%% Do not edit unless you really know what you are doing.
\documentclass{article}
\usepackage[sc]{mathpazo}
\usepackage[T1]{fontenc}
\usepackage{geometry}
\geometry{verbose,tmargin=2.5cm,bmargin=2.5cm,lmargin=2.5cm,rmargin=2.5cm}
\setcounter{secnumdepth}{2}
\setcounter{tocdepth}{2}
\usepackage{url}
\usepackage[unicode=true,pdfusetitle,
 bookmarks=true,bookmarksnumbered=true,bookmarksopen=true,bookmarksopenlevel=2,
 breaklinks=false,pdfborder={0 0 1},backref=false,colorlinks=false]
 {hyperref}
\hypersetup{
 pdfstartview={XYZ null null 1}}
\usepackage{breakurl}
\begin{document}
\SweaveOpts{concordance=TRUE}
<<setup, include=FALSE, cache=FALSE>>=
library(knitr)
# set global chunk options
opts_chunk$set(fig.path='figure/minimal-', fig.align='center', fig.show='hold')
options(formatR.arrow=TRUE,width=90)
@

\title{A Minimal Demo of knitr}

\author{Yihui Xie}

\maketitle
You can test if \textbf{knitr} works with this minimal demo. OK, let's
get started with some boring random numbers:

<<boring-random>>=
set.seed(1121)
(x=rnorm(20))
mean(x);var(x)
@

The first element of \texttt{x} is \Sexpr{x[1]}. Boring boxplots
and histograms recorded by the PDF device:

<<boring-plots, fig.width=4, fig.height=4, out.width='.4\linewidth'>>=
## two plots side by side (option fig.show='hold')
par(mar=c(4,4,.1,.1),cex.lab=.95,cex.axis=.9,mgp=c(2,.7,0),tcl=-.3,las=1)
boxplot(x)
hist(x,main='')
@

Do the above chunks work? You should be able to compile the \TeX{}
document and get a PDF file like this one: \url{https://github.com/yihui/knitr/releases/download/doc/knitr-minimal.pdf}.
The Rnw source of this document is at \url{https://github.com/yihui/knitr/blob/master/inst/examples/knitr-minimal.Rnw}.
\end{document}

当我 "Compile PDF" 时，我得到了这个：

我收到的唯一警告如下：

我是运行最新的一切(Rstudio/knitr/R)

> sessionInfo()
R version 3.3.2 (2016-10-31)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: Fedora 24 (Workstation Edition)

locale:
 [1] LC_CTYPE=en_GB.UTF-8       LC_NUMERIC=C               LC_TIME=en_GB.UTF-8       
 [4] LC_COLLATE=en_GB.UTF-8     LC_MONETARY=en_GB.UTF-8    LC_MESSAGES=en_GB.UTF-8   
 [7] LC_PAPER=en_GB.UTF-8       LC_NAME=C                  LC_ADDRESS=C              
[10] LC_TELEPHONE=C             LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] knitr_1.15

loaded via a namespace (and not attached):
[1] tools_3.3.2

编辑：似乎没有创建带有数字的子目录，我得到一个带有数字的 Rplot.pdf...

Answer 1

我通过删除 Rstudio 解决了它。只需使用 R) knit('example.Rnw') 然后 bash) pdflatex example.tex

knitr 最小示例不显示数字

knitr minimal example do no show figures

pdf

latex

r

knitr

rnw