Raking 多重推算数据集
Raking Multiple Imputed dataset
这是我之前 post
的延续
我想 运行 在我的估算数据集中使用 rake()
函数。但是,它似乎没有找到输入变量。下面是一个示例代码:
library(mitools)
library(survey)
library(mice)
data(nhanes)
nhanes2$hyp <- as.factor(nhanes2$hyp)
imp <- mice(nhanes2,method=c("polyreg","pmm","logreg","pmm"), seed = 23109)
imp_list <- lapply( 1:5 , function( n ) complete( imp , action = n ) )
des<-svydesign(id=~1, data=imputationList(imp_list))
age.dist <- data.frame(age = c("20-39","40-59", "60-99"),
Freq = nrow(des) * c(0.5, 0.3, .2))
small.svy.rake <- rake(design = des,
sample.margins = list(~age),
population.margins = list(age.dist))
Error in eval(expr, envir, enclos) : object 'age' not found
如果我将输入数据更改为单个数据集,代码就可以工作。也就是说,我有这个
而不是 des<-svydesign(id=~1, data=imputationList(imp_list))
data3 <- complete(imp,1)
des<-svydesign(id=~1, data=data3)
我如何编辑代码,使其能够识别 rake()
函数中的输入数据集是多重插补类型?
# copy over the structure of your starting multiply-imputed design
small.svy.rake <- des
# loop through each of the implicates
# applying the `rake` function to each
small.svy.rake$designs <-
lapply(
des$designs ,
rake ,
sample.margins = list(~age),
population.margins = list(age.dist)
)
# as you'd expect, the overall number changes..
MIcombine( with( des , svymean( ~ bmi ) ) )
MIcombine( with( small.svy.rake , svymean( ~ bmi ) ) )
# ..but the within-age-category numbers do not
MIcombine( with( des , svyby( ~ bmi , ~ age , svymean ) ) )
MIcombine( with( small.svy.rake , svyby( ~ bmi , ~ age , svymean ) ) )
这是我之前 post
的延续我想 运行 在我的估算数据集中使用 rake()
函数。但是,它似乎没有找到输入变量。下面是一个示例代码:
library(mitools)
library(survey)
library(mice)
data(nhanes)
nhanes2$hyp <- as.factor(nhanes2$hyp)
imp <- mice(nhanes2,method=c("polyreg","pmm","logreg","pmm"), seed = 23109)
imp_list <- lapply( 1:5 , function( n ) complete( imp , action = n ) )
des<-svydesign(id=~1, data=imputationList(imp_list))
age.dist <- data.frame(age = c("20-39","40-59", "60-99"),
Freq = nrow(des) * c(0.5, 0.3, .2))
small.svy.rake <- rake(design = des,
sample.margins = list(~age),
population.margins = list(age.dist))
Error in eval(expr, envir, enclos) : object 'age' not found
如果我将输入数据更改为单个数据集,代码就可以工作。也就是说,我有这个
而不是des<-svydesign(id=~1, data=imputationList(imp_list))
data3 <- complete(imp,1)
des<-svydesign(id=~1, data=data3)
我如何编辑代码,使其能够识别 rake()
函数中的输入数据集是多重插补类型?
# copy over the structure of your starting multiply-imputed design
small.svy.rake <- des
# loop through each of the implicates
# applying the `rake` function to each
small.svy.rake$designs <-
lapply(
des$designs ,
rake ,
sample.margins = list(~age),
population.margins = list(age.dist)
)
# as you'd expect, the overall number changes..
MIcombine( with( des , svymean( ~ bmi ) ) )
MIcombine( with( small.svy.rake , svymean( ~ bmi ) ) )
# ..but the within-age-category numbers do not
MIcombine( with( des , svyby( ~ bmi , ~ age , svymean ) ) )
MIcombine( with( small.svy.rake , svyby( ~ bmi , ~ age , svymean ) ) )