Python:如何跨多个区间创建固定范围的散点图?

Python: how to create scatterplots of fixed ranges, across several intervals?

我有以下 pandas DataFrame:

import pandas as pd
df = pd.read_table(...)
df

>>> df
>>>    interval  location type  y_axis
0        01      1230    X      50
1        01      1609    X      55
2        01      1903    Y      54
3        01      2574    A      58
4        01      3151    A      57
5        01      3198    B      46
6        01      3312    X      50
...                 .....
         02      42      X      31
         02      214     A      23
         02      598     X      28
....

有几个间隔,例如0102等。在每个区间内,数据点在1到10,000的范围内。在 df 中,第一个数据点位于 40,下一个数据点位于 136,依此类推。

间隔 02 的范围也是从 1 到 15,000。

我想创建一个散点图,以便为每个间隔按比例绘制 1 到 15000 的范围。然后第一个点将绘制在 1230,下一个绘制在 1609,等等。我还想要一条垂直线来显示间隔的位置。散点图的 x 轴的间距应为 1 到 10,000。每个区间是一个 "region",包含从 1 到 10,000 的 x 轴。所以x轴上的坐标是interval1: 1 to 15000, interval2: 1 to 15000, interval 3: 1 to 15000, 等等(这几乎就像是几个单独的散点图串联在一起。)

如何做到这一点?没有这种复杂的间隔,如果想从这个 DataFrame 创建一个散点图,可以使用:

df.plot(kind='scatter', x = "location", y = "y_axis")

这是前 50 行:

d = {"interval" : ["01",                                                                                                                                                                                                              
 "01", "01", "01", "01", "01", "01", "01", "01", "01", "01", "01",                                                                                                                                                                                                          
 "01", "01", "01", "01", "01", "01", "01", "01", "01", "01", "01",                                                                                                                                                                                                          
 "01", "01", "01", "01", "01", "01", "01", "01", "01", "01", "01",                                                                                                                                                                                                          
 "01", "01", "01", "01", "01", "01", "01", "01", "01", "01", "01",                                                                                                                                                                                                          
 "01", "01", "01", "01", "01"], "location" : [1230, 1609,                                                                                                                                                                                                      
 1903, 2574, 3151, 3198, 3312, 3659, 3709,                                                                                                                                                                                                      
 3725, 4172, 4542, 4860, 4900, 5068, 5220,                                                                                                                                                                                                      
 5260, 5339, 5442, 5529, 5773, 6128, 6165,                                                                                                                                                                                                      
 6177, 6269, 6275, 6460, 7167, 7361, 7361,                                                                                                                                                                                                      
 8051, 8222, 8305, 8992, 9104, 9439, 9844,                                                                                                                                                                                                      
 10045, 10764, 10787, 11104, 11478, 11508,                                                                                                                                                                                                          
 11684, 12490, 12590, 12794, 12803, 13823,                                                                                                                                                                                                          
 13982], "type" : ["X", "X", "Y", "A", "A",                                                                                                                                                                                                              
     "B", "X", "X", "X", "B", "B", "A", "A", "A", "B", "B", "X",                                                                                                                                                                                                            
     "B", "Y", "X", "X", "Y", "Y", "C", "A", "X", "X", "Z", "Z",                                                                                                                                                                                                            
     "B", "X", "X", "A", "A", "Y", "X", "A", "X", "X", "Z", "Z",                                                                                                                                                                                                            
     "C", "X", "Y", "Y", "Z", "Z", "Z", "Z", "Z"],  "y_axis" : [50, 55, 
    54, 58, 57, 46, 50, 55, 46, 42, 56, 55, 55, 45, 52, 51, 45, 48, 50,
     49, 53, 55, 45, 40, 49, 37, 52, 58, 52, 4, 58, 52, 49, 58, 50, 55, 
    56, 53, 58, 43, 55, 55, 44, 52, 59, 49, 53, 39, 60, 52]}

您似乎想为每个类别绘制不同的散点图 "interval"。
这可以通过按相应列对数据框进行分组来完成。

import pandas as pd
import numpy as np
import matplotlib.pyplot as plt

cat = ["01"] *5 + ["02"]*4
x = np.append(np.arange(1,6), np.arange(2.5,4.1,0.5))
y = np.random.randint(12,24, size=len(cat))
df = pd.DataFrame({"cat":cat, "x":x, "y":y})

fig, ax = plt.subplots()
colors={"01":"crimson", "02":"darkblue"}
for cat, grouped in df.groupby("cat"):
    grouped.plot(kind="scatter", x="x", y="y", ax=ax, label=cat, color=colors[cat])

plt.show()

这里的主要挑战似乎是您希望 x 轴既是分类轴(区间 0102 等)又是度量轴(值 1-15000).正如您甚至在 post 中指出的那样,您实际上是在谈论使用共享 y 轴绘制多个散点图。我建议您使用 subplotsgroupby 来做到这一点。您可以使用 subplots_adjust() 调整图之间的 space,正如我在这个答案中所做的那样。

首先,使用来自 OP 的 d 生成一些示例数据。我们还将随机 select 一半的观察值并将它们更改为 interval=02,以演示所需的镶板:

import pandas as pd
import numpy as np

df = pd.DataFrame(d)

# shuffle rows 
# (taken from this answer: 
df = df.reindex(np.random.permutation(df.index))

# randomly select half of the rows for changing to interval 02
interval02 = df.sample(int(df.shape[0]/2.)).index
df.loc[interval02, 'interval'] = "02"

现在使用 pyplot 指定并排子图,并删除图之间的任何填充。

from matplotlib import pyplot as plt

# n_plots = number of different interval values
n_plots = len(df.interval.unique())

fig, axes = plt.subplots(1, n_plots, figsize=(10,5), sharey=True)

# remove space between plots
fig.subplots_adjust(hspace=0, wspace=0)

最后,groupby interval 和情节:

for i, (name, group) in enumerate(df.groupby('interval')):
    group.plot(kind="scatter", x='location', y='y_axis', 
               ax=axes[i], title="Interval {}".format(name))

使用 Altair,您可以轻松地将两个间隔分开 columns/colors。

import pandas as pd
import numpy as np
import matplotlib.pyplot as plt

cat = ["01"] *5 + ["02"]*4
x = np.append(np.arange(1,6), np.arange(2.5,4.1,0.5))
y = np.random.randint(12,24, size=len(cat))
df = pd.DataFrame({"cat":cat, "x":x, "y":y})

按列

from altair import *
Chart(df).mark_point().encode(x='x', y='y', column='cat').configure_cell(width=200, height=150)

按颜色

from altair import *
Chart(df).mark_point().encode(x='x', y='y', color='cat').configure_cell(width=200, height=150)