Rgdal 包安装:projects.h:没有那个文件或目录(错误)
Rgdal package install: projects.h: No such file or directory (error)
我正在尝试在我的本地服务器上安装 Rgdal
程序包(未连接到互联网)。当我 运行 install.packages("rgdal_1.2-15.tar.gz","/usr/lib64/R/library/",repos=NULL)
我得到一个错误 inverser.c:4:22: error: projects.h: No such file or directory
这是安装过程的输出:
* installing *source* package ‘rgdal’ ...
** package ‘rgdal’ successfully unpacked and MD5 sums checked
configure: CC: gcc -m64 -std=gnu99
configure: CXX: g++ -m64
configure: rgdal: 1.2-15
checking for /usr/bin/svnversion... no
configure: svn revision: 691
checking for gdal-config... /usr/bin/gdal-config
checking gdal-config usability... yes
configure: GDAL: 1.8.1
checking GDAL version >= 1.6.3... yes
checking gdal: linking with --libs only... yes
checking GDAL: /usr/share/gdal/pcs.csv readable... yes
configure: -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -I/usr/include/gdal
checking proj_api.h presence and usability... yes
checking PROJ.4 version: ... 4.8.0
checking PROJ.4: epsg found and readable... yes
checking PROJ.4: conus found and readable... yes
configure: Package CPP flags: -I/usr/include/gdal
configure: Package LIBS: -lgdal -lproj
configure: creating ./config.status
config.status: creating src/Makevars
** libs
g++ -m64 -std=c++0x -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c OGR_write.cpp -o OGR_write.o
g++ -m64 -std=c++0x -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c gdal-bindings.cpp -o gdal-bindings.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c init.c -o init.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c inverser.c -o inverser.o
inverser.c:4:22: error: projects.h: No such file or directory
inverser.c:6: error: expected ‘)’ before ‘*’ token
make: *** [inverser.o] Error 1
ERROR: compilation failed for package ‘rgdal’
* removing ‘/usr/lib64/R/library/rgdal’
Warning message:
In install.packages("/data/ZUY10/Repo/R/rgdal_1.2-15.tar.gz", "/usr/lib64/R/library/", :
installation of package ‘/data/ZUY10/Repo/R/rgdal_1.2-15.tar.gz’ had non-zero exit status
我在这一步之前做了什么:
因为我的服务器是本地的,所以我必须在我的本地服务器上手动安装所有包 "dependencies",所以我手动安装了大约 30 个包,如您所见,主要是 PROJ.4 和 Gdal here.
我在这里安装 RGDAL 软件包时错过了什么?
header projects.h
来自 PROJ.4。 header 文件位于您系统的什么位置?您可以通过 --with-proj-include=DIR
将此位置传递给 configure
脚本,即
install.packages("rgdal_1.2-15.tar.gz",
"/usr/lib64/R/library/",
repos=NULL,
configure.args="--with-proj-include=DIR")
仅 recently.
已将 projects.h
的检查添加到 rgdal
我在 RHEL7.7
上进行多次搜索时也遇到了上述问题。我解决如下:
#cd /opt
#wget http://download.osgeo.org/gdal/2.0.1/gdal-2.0.1.tar.gz
#./configure
#make
#make install
#echo "/usr/local/lib" >> /etc/ld.so.conf.d/libgdal-x86_64.conf
#ldconfig
#yum install proj.x86_64 proj-devel.x86_64 proj-epsg.x86_64 proj-nad.x86_64
希望对您有所帮助。
我正在尝试在我的本地服务器上安装 Rgdal
程序包(未连接到互联网)。当我 运行 install.packages("rgdal_1.2-15.tar.gz","/usr/lib64/R/library/",repos=NULL)
我得到一个错误 inverser.c:4:22: error: projects.h: No such file or directory
这是安装过程的输出:
* installing *source* package ‘rgdal’ ...
** package ‘rgdal’ successfully unpacked and MD5 sums checked
configure: CC: gcc -m64 -std=gnu99
configure: CXX: g++ -m64
configure: rgdal: 1.2-15
checking for /usr/bin/svnversion... no
configure: svn revision: 691
checking for gdal-config... /usr/bin/gdal-config
checking gdal-config usability... yes
configure: GDAL: 1.8.1
checking GDAL version >= 1.6.3... yes
checking gdal: linking with --libs only... yes
checking GDAL: /usr/share/gdal/pcs.csv readable... yes
configure: -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -I/usr/include/gdal
checking proj_api.h presence and usability... yes
checking PROJ.4 version: ... 4.8.0
checking PROJ.4: epsg found and readable... yes
checking PROJ.4: conus found and readable... yes
configure: Package CPP flags: -I/usr/include/gdal
configure: Package LIBS: -lgdal -lproj
configure: creating ./config.status
config.status: creating src/Makevars
** libs
g++ -m64 -std=c++0x -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c OGR_write.cpp -o OGR_write.o
g++ -m64 -std=c++0x -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c gdal-bindings.cpp -o gdal-bindings.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c init.c -o init.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c inverser.c -o inverser.o
inverser.c:4:22: error: projects.h: No such file or directory
inverser.c:6: error: expected ‘)’ before ‘*’ token
make: *** [inverser.o] Error 1
ERROR: compilation failed for package ‘rgdal’
* removing ‘/usr/lib64/R/library/rgdal’
Warning message:
In install.packages("/data/ZUY10/Repo/R/rgdal_1.2-15.tar.gz", "/usr/lib64/R/library/", :
installation of package ‘/data/ZUY10/Repo/R/rgdal_1.2-15.tar.gz’ had non-zero exit status
我在这一步之前做了什么:
因为我的服务器是本地的,所以我必须在我的本地服务器上手动安装所有包 "dependencies",所以我手动安装了大约 30 个包,如您所见,主要是 PROJ.4 和 Gdal here.
我在这里安装 RGDAL 软件包时错过了什么?
header projects.h
来自 PROJ.4。 header 文件位于您系统的什么位置?您可以通过 --with-proj-include=DIR
将此位置传递给 configure
脚本,即
install.packages("rgdal_1.2-15.tar.gz",
"/usr/lib64/R/library/",
repos=NULL,
configure.args="--with-proj-include=DIR")
仅 recently.
已将projects.h
的检查添加到 rgdal
我在 RHEL7.7
上进行多次搜索时也遇到了上述问题。我解决如下:
#cd /opt
#wget http://download.osgeo.org/gdal/2.0.1/gdal-2.0.1.tar.gz
#./configure
#make
#make install
#echo "/usr/local/lib" >> /etc/ld.so.conf.d/libgdal-x86_64.conf
#ldconfig
#yum install proj.x86_64 proj-devel.x86_64 proj-epsg.x86_64 proj-nad.x86_64
希望对您有所帮助。