Arnoldi 迭代的 Wiki 示例仅适用于实矩阵?
Wiki example for Arnoldi iteration only works for real matrices?
Wikipedia entry for the Arnoldi method provides a Python example that produces basis of the Krylov subspace of a matrix A
. Supposedly, if A
is Hermitian (i.e. if A == A.conj().T
) then the Hessenberg matrix h
generated by this algorithm is tridiagonal (source)。但是,当我在现实世界的 Hermitian 矩阵上使用 Wikipedia 代码时,Hessenberg 矩阵根本不是三对角矩阵。当我对 A
的实部进行计算时(因此 A == A.T
),我确实得到了一个三对角 Hessenberg 矩阵,因此 A
的虚部似乎有问题.有人知道为什么维基百科代码没有产生预期的结果吗?
工作示例:
import numpy as np
import matplotlib.pyplot as plt
from scipy.linalg import circulant
def arnoldi_iteration(A, b, n):
m = A.shape[0]
h = np.zeros((n + 1, n), dtype=np.complex)
Q = np.zeros((m, n + 1), dtype=np.complex)
q = b / np.linalg.norm(b) # Normalize the input vector
Q[:, 0] = q # Use it as the first Krylov vector
for k in range(n):
v = A.dot(q) # Generate a new candidate vector
for j in range(k + 1): # Subtract the projections on previous vectors
h[j, k] = np.dot(Q[:, j], v)
v = v - h[j, k] * Q[:, j]
h[k + 1, k] = np.linalg.norm(v)
eps = 1e-12 # If v is shorter than this threshold it is the zero vector
if h[k + 1, k] > eps: # Add the produced vector to the list, unless
q = v / h[k + 1, k] # the zero vector is produced.
Q[:, k + 1] = q
else: # If that happens, stop iterating.
return Q, h
return Q, h
# Construct matrix A
N = 2**4
I = np.eye(N)
k = np.fft.fftfreq(N, 1.0 / N) + 0.5
alpha = np.linspace(0.1, 1.0, N)*2e2
c = np.fft.fft(alpha) / N
C = circulant(c)
A = np.einsum("i, ij, j->ij", k, C, k)
# Show that A is Hermitian
print(np.allclose(A, A.conj().T))
# Arbitrary (random) initial vector
np.random.seed(0)
v = np.random.rand(N)
# Perform Arnoldi iteration with complex A
_, h = arnoldi_iteration(A, v, N)
# Perform Arnoldi iteration with real A
_, h2 = arnoldi_iteration(np.real(A), v, N)
# Plot results
plt.subplot(121)
plt.imshow(np.abs(h))
plt.title("Complex A")
plt.subplot(122)
plt.imshow(np.abs(h2))
plt.title("Real A")
plt.tight_layout()
plt.show()
结果:
浏览了一些会议演示幻灯片后,我意识到在某些时候 Q
必须在 A
是复数的情况下共轭。正确的算法贴在下面供参考,并标出代码更改(注意,此更正也已提交到维基百科词条):
import numpy as np
def arnoldi_iteration(A, b, n):
m = A.shape[0]
h = np.zeros((n + 1, n), dtype=np.complex)
Q = np.zeros((m, n + 1), dtype=np.complex)
q = b / np.linalg.norm(b)
Q[:, 0] = q
for k in range(n):
v = A.dot(q)
for j in range(k + 1):
h[j, k] = np.dot(Q[:, j].conj(), v) # <-- Q needs conjugation!
v = v - h[j, k] * Q[:, j]
h[k + 1, k] = np.linalg.norm(v)
eps = 1e-12
if h[k + 1, k] > eps:
q = v / h[k + 1, k]
Q[:, k + 1] = q
else:
return Q, h
return Q, h
Wikipedia entry for the Arnoldi method provides a Python example that produces basis of the Krylov subspace of a matrix A
. Supposedly, if A
is Hermitian (i.e. if A == A.conj().T
) then the Hessenberg matrix h
generated by this algorithm is tridiagonal (source)。但是,当我在现实世界的 Hermitian 矩阵上使用 Wikipedia 代码时,Hessenberg 矩阵根本不是三对角矩阵。当我对 A
的实部进行计算时(因此 A == A.T
),我确实得到了一个三对角 Hessenberg 矩阵,因此 A
的虚部似乎有问题.有人知道为什么维基百科代码没有产生预期的结果吗?
工作示例:
import numpy as np
import matplotlib.pyplot as plt
from scipy.linalg import circulant
def arnoldi_iteration(A, b, n):
m = A.shape[0]
h = np.zeros((n + 1, n), dtype=np.complex)
Q = np.zeros((m, n + 1), dtype=np.complex)
q = b / np.linalg.norm(b) # Normalize the input vector
Q[:, 0] = q # Use it as the first Krylov vector
for k in range(n):
v = A.dot(q) # Generate a new candidate vector
for j in range(k + 1): # Subtract the projections on previous vectors
h[j, k] = np.dot(Q[:, j], v)
v = v - h[j, k] * Q[:, j]
h[k + 1, k] = np.linalg.norm(v)
eps = 1e-12 # If v is shorter than this threshold it is the zero vector
if h[k + 1, k] > eps: # Add the produced vector to the list, unless
q = v / h[k + 1, k] # the zero vector is produced.
Q[:, k + 1] = q
else: # If that happens, stop iterating.
return Q, h
return Q, h
# Construct matrix A
N = 2**4
I = np.eye(N)
k = np.fft.fftfreq(N, 1.0 / N) + 0.5
alpha = np.linspace(0.1, 1.0, N)*2e2
c = np.fft.fft(alpha) / N
C = circulant(c)
A = np.einsum("i, ij, j->ij", k, C, k)
# Show that A is Hermitian
print(np.allclose(A, A.conj().T))
# Arbitrary (random) initial vector
np.random.seed(0)
v = np.random.rand(N)
# Perform Arnoldi iteration with complex A
_, h = arnoldi_iteration(A, v, N)
# Perform Arnoldi iteration with real A
_, h2 = arnoldi_iteration(np.real(A), v, N)
# Plot results
plt.subplot(121)
plt.imshow(np.abs(h))
plt.title("Complex A")
plt.subplot(122)
plt.imshow(np.abs(h2))
plt.title("Real A")
plt.tight_layout()
plt.show()
结果:
浏览了一些会议演示幻灯片后,我意识到在某些时候 Q
必须在 A
是复数的情况下共轭。正确的算法贴在下面供参考,并标出代码更改(注意,此更正也已提交到维基百科词条):
import numpy as np
def arnoldi_iteration(A, b, n):
m = A.shape[0]
h = np.zeros((n + 1, n), dtype=np.complex)
Q = np.zeros((m, n + 1), dtype=np.complex)
q = b / np.linalg.norm(b)
Q[:, 0] = q
for k in range(n):
v = A.dot(q)
for j in range(k + 1):
h[j, k] = np.dot(Q[:, j].conj(), v) # <-- Q needs conjugation!
v = v - h[j, k] * Q[:, j]
h[k + 1, k] = np.linalg.norm(v)
eps = 1e-12
if h[k + 1, k] > eps:
q = v / h[k + 1, k]
Q[:, k + 1] = q
else:
return Q, h
return Q, h