如何使用安装的 conda Java 修复 "unable to find valid certification path to requested target" 错误?

How can I fix a "unable to find valid certification path to requested target" error using conda installed Java?

我昨天使用了这个命令,它运行良好。我可能安装了不同的 perl 或 ava,但我不确定为什么会导致错误。我在 Whosebug 上查看了这方面的其他示例,但它们似乎适用于网络浏览器。

如何使用我的 conda 环境在远程服务器上修复此问题?

(bbmap_env) -bash-4.1$ sendsketch.sh in=scaffolds.fasta out=sketch.txt outsketch=sketch overwrite=t
Adding /usr/local/devel/ANNOTATION/jespinoz/anaconda3/envs/bbmap_env/opt/bbmap-38.58-0/resources/blacklist_refseq_species_250.sketch to blacklist.
0.036 seconds.
Loaded 1 sketch in 6.969 seconds.
javax.net.ssl.SSLHandshakeException: PKIX path building failed: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.ssl.Alert.createSSLException(Alert.java:128)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:321)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:264)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:259)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.checkServerCerts(CertificateMessage.java:642)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.onCertificate(CertificateMessage.java:461)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.consume(CertificateMessage.java:361)
    at java.base/sun.security.ssl.SSLHandshake.consume(SSLHandshake.java:392)
    at java.base/sun.security.ssl.HandshakeContext.dispatch(HandshakeContext.java:444)
    at java.base/sun.security.ssl.HandshakeContext.dispatch(HandshakeContext.java:421)
    at java.base/sun.security.ssl.TransportContext.dispatch(TransportContext.java:178)
    at java.base/sun.security.ssl.SSLTransport.decode(SSLTransport.java:164)
    at java.base/sun.security.ssl.SSLSocketImpl.decode(SSLSocketImpl.java:1152)
    at java.base/sun.security.ssl.SSLSocketImpl.readHandshakeRecord(SSLSocketImpl.java:1063)
    at java.base/sun.security.ssl.SSLSocketImpl.startHandshake(SSLSocketImpl.java:402)
    at java.base/sun.net.www.protocol.https.HttpsClient.afterConnect(HttpsClient.java:567)
    at java.base/sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.connect(AbstractDelegateHttpsURLConnection.java:185)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getOutputStream0(HttpURLConnection.java:1356)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getOutputStream(HttpURLConnection.java:1331)
    at java.base/sun.net.www.protocol.https.HttpsURLConnectionImpl.getOutputStream(HttpsURLConnectionImpl.java:241)
    at server.ServerTools.sendAndReceive(ServerTools.java:98)
    at sketch.SendSketch.processRemote(SendSketch.java:386)
    at sketch.SendSketch.process(SendSketch.java:308)
    at sketch.SendSketch.main(SendSketch.java:53)
Caused by: sun.security.validator.ValidatorException: PKIX path building failed: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.validator.PKIXValidator.doBuild(PKIXValidator.java:385)
    at java.base/sun.security.validator.PKIXValidator.engineValidate(PKIXValidator.java:290)
    at java.base/sun.security.validator.Validator.validate(Validator.java:264)
    at java.base/sun.security.ssl.X509TrustManagerImpl.validate(X509TrustManagerImpl.java:321)
    at java.base/sun.security.ssl.X509TrustManagerImpl.checkTrusted(X509TrustManagerImpl.java:221)
    at java.base/sun.security.ssl.X509TrustManagerImpl.checkServerTrusted(X509TrustManagerImpl.java:129)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.checkServerCerts(CertificateMessage.java:626)
    ... 19 more
Caused by: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.provider.certpath.SunCertPathBuilder.build(SunCertPathBuilder.java:141)
    at java.base/sun.security.provider.certpath.SunCertPathBuilder.engineBuild(SunCertPathBuilder.java:126)
    at java.base/java.security.cert.CertPathBuilder.build(CertPathBuilder.java:297)
    at java.base/sun.security.validator.PKIXValidator.doBuild(PKIXValidator.java:380)
    ... 25 more
javax.net.ssl.SSLHandshakeException: PKIX path building failed: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
    at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.run(HttpURLConnection.java:1963)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.run(HttpURLConnection.java:1958)
    at java.base/java.security.AccessController.doPrivileged(Native Method)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getChainedException(HttpURLConnection.java:1957)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1525)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1509)
    at java.base/java.net.HttpURLConnection.getResponseCode(HttpURLConnection.java:527)
    at java.base/sun.net.www.protocol.https.HttpsURLConnectionImpl.getResponseCode(HttpsURLConnectionImpl.java:329)
    at server.ServerTools.sendAndReceive(ServerTools.java:134)
    at sketch.SendSketch.processRemote(SendSketch.java:386)
    at sketch.SendSketch.process(SendSketch.java:308)
    at sketch.SendSketch.main(SendSketch.java:53)
Caused by: javax.net.ssl.SSLHandshakeException: PKIX path building failed: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.ssl.Alert.createSSLException(Alert.java:128)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:321)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:264)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:259)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.checkServerCerts(CertificateMessage.java:642)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.onCertificate(CertificateMessage.java:461)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.consume(CertificateMessage.java:361)
    at java.base/sun.security.ssl.SSLHandshake.consume(SSLHandshake.java:392)
    at java.base/sun.security.ssl.HandshakeContext.dispatch(HandshakeContext.java:444)
    at java.base/sun.security.ssl.HandshakeContext.dispatch(HandshakeContext.java:421)
    at java.base/sun.security.ssl.TransportContext.dispatch(TransportContext.java:178)
    at java.base/sun.security.ssl.SSLTransport.decode(SSLTransport.java:164)
    at java.base/sun.security.ssl.SSLSocketImpl.decode(SSLSocketImpl.java:1152)
    at java.base/sun.security.ssl.SSLSocketImpl.readHandshakeRecord(SSLSocketImpl.java:1063)
    at java.base/sun.security.ssl.SSLSocketImpl.startHandshake(SSLSocketImpl.java:402)
    at java.base/sun.net.www.protocol.https.HttpsClient.afterConnect(HttpsClient.java:567)
    at java.base/sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.connect(AbstractDelegateHttpsURLConnection.java:185)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1581)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1509)
    at java.base/sun.net.www.protocol.https.HttpsURLConnectionImpl.getInputStream(HttpsURLConnectionImpl.java:245)
    at server.ServerTools.sendAndReceive(ServerTools.java:127)
    ... 3 more
Caused by: sun.security.validator.ValidatorException: PKIX path building failed: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.validator.PKIXValidator.doBuild(PKIXValidator.java:385)
    at java.base/sun.security.validator.PKIXValidator.engineValidate(PKIXValidator.java:290)
    at java.base/sun.security.validator.Validator.validate(Validator.java:264)
    at java.base/sun.security.ssl.X509TrustManagerImpl.validate(X509TrustManagerImpl.java:321)
    at java.base/sun.security.ssl.X509TrustManagerImpl.checkTrusted(X509TrustManagerImpl.java:221)
    at java.base/sun.security.ssl.X509TrustManagerImpl.checkServerTrusted(X509TrustManagerImpl.java:129)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.checkServerCerts(CertificateMessage.java:626)
    ... 19 more
Caused by: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.provider.certpath.SunCertPathBuilder.build(SunCertPathBuilder.java:141)
    at java.base/sun.security.provider.certpath.SunCertPathBuilder.engineBuild(SunCertPathBuilder.java:126)
    at java.base/java.security.cert.CertPathBuilder.build(CertPathBuilder.java:297)
    at java.base/sun.security.validator.PKIXValidator.doBuild(PKIXValidator.java:380)
    ... 25 more
javax.net.ssl.SSLHandshakeException: PKIX path building failed: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.ssl.Alert.createSSLException(Alert.java:128)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:321)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:264)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:259)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.checkServerCerts(CertificateMessage.java:642)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.onCertificate(CertificateMessage.java:461)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.consume(CertificateMessage.java:361)
    at java.base/sun.security.ssl.SSLHandshake.consume(SSLHandshake.java:392)
    at java.base/sun.security.ssl.HandshakeContext.dispatch(HandshakeContext.java:444)
    at java.base/sun.security.ssl.HandshakeContext.dispatch(HandshakeContext.java:421)
    at java.base/sun.security.ssl.TransportContext.dispatch(TransportContext.java:178)
    at java.base/sun.security.ssl.SSLTransport.decode(SSLTransport.java:164)
    at java.base/sun.security.ssl.SSLSocketImpl.decode(SSLSocketImpl.java:1152)
    at java.base/sun.security.ssl.SSLSocketImpl.readHandshakeRecord(SSLSocketImpl.java:1063)
    at java.base/sun.security.ssl.SSLSocketImpl.startHandshake(SSLSocketImpl.java:402)
    at java.base/sun.net.www.protocol.https.HttpsClient.afterConnect(HttpsClient.java:567)
    at java.base/sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.connect(AbstractDelegateHttpsURLConnection.java:185)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1581)
    at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1509)
    at java.base/sun.net.www.protocol.https.HttpsURLConnectionImpl.getInputStream(HttpsURLConnectionImpl.java:245)
    at server.ServerTools.sendAndReceive(ServerTools.java:127)
    at sketch.SendSketch.processRemote(SendSketch.java:386)
    at sketch.SendSketch.process(SendSketch.java:308)
    at sketch.SendSketch.main(SendSketch.java:53)
Caused by: sun.security.validator.ValidatorException: PKIX path building failed: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.validator.PKIXValidator.doBuild(PKIXValidator.java:385)
    at java.base/sun.security.validator.PKIXValidator.engineValidate(PKIXValidator.java:290)
    at java.base/sun.security.validator.Validator.validate(Validator.java:264)
    at java.base/sun.security.ssl.X509TrustManagerImpl.validate(X509TrustManagerImpl.java:321)
    at java.base/sun.security.ssl.X509TrustManagerImpl.checkTrusted(X509TrustManagerImpl.java:221)
    at java.base/sun.security.ssl.X509TrustManagerImpl.checkServerTrusted(X509TrustManagerImpl.java:129)
    at java.base/sun.security.ssl.CertificateMessage$T12CertificateConsumer.checkServerCerts(CertificateMessage.java:626)
    ... 19 more
Caused by: sun.security.provider.certpath.SunCertPathBuilderException: unable to find valid certification path to requested target
    at java.base/sun.security.provider.certpath.SunCertPathBuilder.build(SunCertPathBuilder.java:141)
    at java.base/sun.security.provider.certpath.SunCertPathBuilder.engineBuild(SunCertPathBuilder.java:126)
    at java.base/java.security.cert.CertPathBuilder.build(CertPathBuilder.java:297)
    at java.base/sun.security.validator.PKIXValidator.doBuild(PKIXValidator.java:380)
    ... 25 more
ERROR: Server returned code 1 and this message:
null
java.lang.Exception: Aborting.
    at shared.KillSwitch.kill(KillSwitch.java:108)
    at sketch.SendSketch.processRemote(SendSketch.java:389)
    at sketch.SendSketch.process(SendSketch.java:308)
    at sketch.SendSketch.main(SendSketch.java:53)

服务器宕机了。现在可以了。 https://www.biostars.org/p/391551/#392603 说明。