OSX Catalina 中 cmath 的 Brew clang++ 问题
Brew clang++ issue with cmath in OSX Catalina
在 OSX 10.15 中编译源 R 包时,cmath 反复出现问题,如下;
In file included from /usr/local/opt/llvm/bin/../include/c++/v1/complex:245:
/usr/local/opt/llvm/bin/../include/c++/v1/cmath:313:9: error: no member named 'signbit' in the global namespace
using ::signbit;
~~^
/usr/local/opt/llvm/bin/../include/c++/v1/cmath:314:9: error: no member named 'fpclassify' in the global namespace
using ::fpclassify;
~~^
/usr/local/opt/llvm/bin/../include/c++/v1/cmath:315:9: error: no member named 'isfinite' in the global namespace; did you mean 'finite'?
using ::isfinite;
~~^
/usr/local/include/math.h:749:12: note: 'finite' declared here
extern int finite(double)
R 的安装输出显示带有以下参数的 clang++;
clang++ -fopenmp -std=gnu++11 -I"/usr/local/Cellar/r/3.6.2/lib/R/include" -DNDEBUG -I"/Volumes/Documents/Library/R/3.x/library/BH/include" -I"/Volumes/Documents/Library/R/3.x/library/Rcpp/include" -I/usr/local/opt/gettext/include -I/usr/local/opt/llvm/include -fPIC -g -O3 -Wall -pipe -Wno-nonnull -pedantic -std=c++11 -mtune=native -c AlphaProcedure.cpp -o AlphaProcedure.o
我读过几篇具有类似问题的类似帖子,但 none 的解决方法到目前为止在我的系统上有效。我真的很感激对此的任何意见。
我的系统:
sw_vers
产品名称:Mac OS X
产品版本:10.15.2
构建版本:19C57
xcodebuild -version
Xcode 11.3
Build version 11C29
clang -v
clang version 9.0.0 (tags/RELEASE_900/final)
Target: x86_64-apple-darwin19.2.0
Thread model: posix
InstalledDir: /usr/local/opt/llvm/bin
gcc -v
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/local/Cellar/gcc/9.2.0_3/libexec/gcc/x86_64-apple-darwin19/9.2.0/lto-wrapper
Target: x86_64-apple-darwin19
Configured with: ../configure --build=x86_64-apple-darwin19 --prefix=/usr/local/Cellar/gcc/9.2.0_3 --libdir=/usr/local/Cellar/gcc/9.2.0_3/lib/gcc/9 --disable-nls --enable-checking=release --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-9 --with-gmp=/usr/local/opt/gmp --with-mpfr=/usr/local/opt/mpfr --with-mpc=/usr/local/opt/libmpc --with-isl=/usr/local/opt/isl --with-system-zlib --with-pkgversion='Homebrew GCC 9.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --disable-multilib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk
Thread model: posix
gcc version 9.2.0 (Homebrew GCC 9.2.0_3)
zshrc 中的 C 编译器标志
CPATH=/usr/local/include
CPPFLAGS=-I/usr/local/opt/gettext/include -I/usr/local/opt/llvm/include
SDKROOT=/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk
LDFLAGS=-L/usr/local/opt/llvm/lib -Wl,-rpath,/usr/local/opt/llvm/lib
Makevars(对于 R)
LLVM_LOC = /usr/local/opt/llvm
CC=clang -fopenmp
CXX=clang++ -foropenmp
CXX11=clang++ -fopenmp
CFLAGS = -g -O3 -Wall -pipe -pedantic -Wno-nonnull -std=gnu99 -mtune=native -pipe
CXXFLAGS = -g -O3 -Wall -pipe -Wno-nonnull -pedantic -std=c++11 -mtune=native
CXX11FLAGS = -g -O3 -Wall -pipe -Wno-nonnull -pedantic -std=c++11 -mtune=native
LDFLAGS=-L/usr/local/opt/gettext/lib -L$(LLVM_LOC)/lib -Wl,-rpath,$(LLVM_LOC)/lib
CPPFLAGS=-I/usr/local/opt/gettext/include -I$(LLVM_LOC)/include
我选择了核选项(全新安装 Catalina)并使用 Apple 提供的 llvm 和 Brew 安装了一些必需的应用程序。所有这些都解决了这个问题。 Makevars 中的一个小修复 CPPFLAGS=-I/usr/local/opt/gettext/include -I$(LLVM_LOC)/include -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include
在 OSX 10.15 中编译源 R 包时,cmath 反复出现问题,如下;
In file included from /usr/local/opt/llvm/bin/../include/c++/v1/complex:245:
/usr/local/opt/llvm/bin/../include/c++/v1/cmath:313:9: error: no member named 'signbit' in the global namespace
using ::signbit;
~~^
/usr/local/opt/llvm/bin/../include/c++/v1/cmath:314:9: error: no member named 'fpclassify' in the global namespace
using ::fpclassify;
~~^
/usr/local/opt/llvm/bin/../include/c++/v1/cmath:315:9: error: no member named 'isfinite' in the global namespace; did you mean 'finite'?
using ::isfinite;
~~^
/usr/local/include/math.h:749:12: note: 'finite' declared here
extern int finite(double)
R 的安装输出显示带有以下参数的 clang++;
clang++ -fopenmp -std=gnu++11 -I"/usr/local/Cellar/r/3.6.2/lib/R/include" -DNDEBUG -I"/Volumes/Documents/Library/R/3.x/library/BH/include" -I"/Volumes/Documents/Library/R/3.x/library/Rcpp/include" -I/usr/local/opt/gettext/include -I/usr/local/opt/llvm/include -fPIC -g -O3 -Wall -pipe -Wno-nonnull -pedantic -std=c++11 -mtune=native -c AlphaProcedure.cpp -o AlphaProcedure.o
我读过几篇具有类似问题的类似帖子,但 none 的解决方法到目前为止在我的系统上有效。我真的很感激对此的任何意见。
我的系统:
sw_vers 产品名称:Mac OS X 产品版本:10.15.2 构建版本:19C57
xcodebuild -version
Xcode 11.3
Build version 11C29
clang -v
clang version 9.0.0 (tags/RELEASE_900/final)
Target: x86_64-apple-darwin19.2.0
Thread model: posix
InstalledDir: /usr/local/opt/llvm/bin
gcc -v
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/local/Cellar/gcc/9.2.0_3/libexec/gcc/x86_64-apple-darwin19/9.2.0/lto-wrapper
Target: x86_64-apple-darwin19
Configured with: ../configure --build=x86_64-apple-darwin19 --prefix=/usr/local/Cellar/gcc/9.2.0_3 --libdir=/usr/local/Cellar/gcc/9.2.0_3/lib/gcc/9 --disable-nls --enable-checking=release --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-9 --with-gmp=/usr/local/opt/gmp --with-mpfr=/usr/local/opt/mpfr --with-mpc=/usr/local/opt/libmpc --with-isl=/usr/local/opt/isl --with-system-zlib --with-pkgversion='Homebrew GCC 9.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --disable-multilib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk
Thread model: posix
gcc version 9.2.0 (Homebrew GCC 9.2.0_3)
zshrc 中的 C 编译器标志
CPATH=/usr/local/include
CPPFLAGS=-I/usr/local/opt/gettext/include -I/usr/local/opt/llvm/include
SDKROOT=/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk
LDFLAGS=-L/usr/local/opt/llvm/lib -Wl,-rpath,/usr/local/opt/llvm/lib
Makevars(对于 R)
LLVM_LOC = /usr/local/opt/llvm
CC=clang -fopenmp
CXX=clang++ -foropenmp
CXX11=clang++ -fopenmp
CFLAGS = -g -O3 -Wall -pipe -pedantic -Wno-nonnull -std=gnu99 -mtune=native -pipe
CXXFLAGS = -g -O3 -Wall -pipe -Wno-nonnull -pedantic -std=c++11 -mtune=native
CXX11FLAGS = -g -O3 -Wall -pipe -Wno-nonnull -pedantic -std=c++11 -mtune=native
LDFLAGS=-L/usr/local/opt/gettext/lib -L$(LLVM_LOC)/lib -Wl,-rpath,$(LLVM_LOC)/lib
CPPFLAGS=-I/usr/local/opt/gettext/include -I$(LLVM_LOC)/include
我选择了核选项(全新安装 Catalina)并使用 Apple 提供的 llvm 和 Brew 安装了一些必需的应用程序。所有这些都解决了这个问题。 Makevars 中的一个小修复 CPPFLAGS=-I/usr/local/opt/gettext/include -I$(LLVM_LOC)/include -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include