如何将 OpenMP 和 MPI 导入大型 CLion CMake 项目？

Question

我是 OpenMP 和 MPI 的新手，我想将 OpenMP 和 MPI 导入到我现有的 CMake 项目中。因此--

首先，我创建了一个非常简单的 MPI 项目。

main.cpp:

#include "mpi.h"
#include "iostream"

int main(int argc, char** argv){
    MPI_Init(NULL, NULL);

    int world_size;
    MPI_Comm_size(MPI_COMM_WORLD, &world_size);

    int world_rank;
    MPI_Comm_rank(MPI_COMM_WORLD, &world_rank);

    char processor_name[MPI_MAX_PROCESSOR_NAME];
    int name_len;
    MPI_Get_processor_name(processor_name, &name_len);

    printf("Hello world from processor %s, rank %d out of %d processors\n",processor_name, world_rank, world_size);

    MPI_Finalize();
}

我可以使用以下命令成功编译和运行项目：

$ mpicxx main.cpp -o main.out
$ mpirun -np 2 main.out

然后我使用 CLion 创建并配置了一个 CMake 项目。我也可以使用 CLion 成功编译并运行它，但它只使用了一个处理器。

CMakeLists.txt:

cmake_minimum_required(VERSION 3.5)
project(Test)
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11")

find_package(MPI)
include_directories(${MPI_INCLUDE_PATH})

SET(CMAKE_CXX_COMPILER mpicxx)
SET(CMAKE_C_COMPILER  mpicc)

set(SOURCE_FILES main.cpp)
add_executable(Test ${SOURCE_FILES})

因此我的第一个问题是如何使用 CLion 使用多个处理器？

其次，我创建了一个简单的 OpenMP 项目并运行成功。

但是我的第二个问题是如何同时包含 MPI 和 OpenMP？ 看来我不能只合并两个 CMakeLists.txt MPI 项目和 OpenMP 项目.因为我收到关于 -fopenmp 标志的错误：

clang: error: unsupported option '-fopenmp'

CMakeLists.txt:

cmake_minimum_required(VERSION 3.12)
project(OpenMP_MPI)

set(CMAKE_CXX_STANDARD 14)

OPTION (USE_OpenMP "Use OpenMP to enamble <omp.h>" ON)

if(APPLE)
    set(CMAKE_C_COMPILER "/usr/local/Cellar/llvm/9.0.0_1/bin/clang")
    set(CMAKE_CXX_COMPILER "/usr/local/Cellar/llvm/9.0.0_1/bin/clang++")
    set(OPENMP_LIBRARIES "/usr/local/Cellar/llvm/9.0.0_1/lib")
    set(OPENMP_INCLUDES "/usr/local/Cellar/llvm/9.0.0_1/include")
    if(CMAKE_C_COMPILER_ID MATCHES "Clang")
        set(OpenMP_C "${CMAKE_C_COMPILER}")
        set(OpenMP_C_FLAGS "-fopenmp=libomp -Wno-unused-command-line-argument")
        set(OpenMP_C_LIB_NAMES "libomp" "libgomp" "libiomp5")
        set(OpenMP_libomp_LIBRARY ${OpenMP_C_LIB_NAMES})
        set(OpenMP_libgomp_LIBRARY ${OpenMP_C_LIB_NAMES})
        set(OpenMP_libiomp5_LIBRARY ${OpenMP_C_LIB_NAMES})
    endif()
    if(CMAKE_CXX_COMPILER_ID MATCHES "Clang")
        set(OpenMP_CXX "${CMAKE_CXX_COMPILER}")
        set(OpenMP_CXX_FLAGS "-fopenmp=libomp -Wno-unused-command-line-argument")
        set(OpenMP_CXX_LIB_NAMES "libomp" "libgomp" "libiomp5")
        set(OpenMP_libomp_LIBRARY ${OpenMP_CXX_LIB_NAMES})
        set(OpenMP_libgomp_LIBRARY ${OpenMP_CXX_LIB_NAMES})
        set(OpenMP_libiomp5_LIBRARY ${OpenMP_CXX_LIB_NAMES})
    endif()
endif()

find_package(OpenMP REQUIRED)
if (OPENMP_FOUND)
    if(APPLE)
        include_directories("${OPENMP_INCLUDES}")
        link_directories("${OPENMP_LIBRARIES}")
    endif()
    set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}")
    set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}")
    # set (CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${OpenMP_EXE_LINKER_FLAGS}")
endif(OPENMP_FOUND)

find_package(MPI REQUIRED)
include_directories(${MPI_INCLUDE_PATH})

SET(CMAKE_CXX_COMPILER mpicxx)
SET(CMAKE_C_COMPILER  mpicc)

add_executable(OpenMP_MPI main.cpp)

Answer 1

Thus my first question is how can I use multiple processors, just like using "mpirun -np 4 xxxx" from terminal?

编译MPI程序时，进程数不会影响编译选项。因此，您的示例代码将适用于您自己提到的多个进程：

$ mpirun -np 4 xxxx

要在 CLion 中执行此操作，请转到 Run/Debug 配置，并将 mpirun 添加为您的可执行文件，将 -np 4 xxxx 添加为您的程序参数，如 here 所示。

But there will be some errors about -fopenmp flag:

我知道在 Mac 上使用 clang 编译 openmp 程序并不是那么简单。您可以查看了解更多信息。

Answer 2

CMakeLists.txt应该没那么复杂吧。应该是这样的：

cmake_minimum_required(VERSION 3.12)
project(OpenMP_MPI)

set(CMAKE_CXX_STANDARD 14)

find_package(MPI REQUIRED)
include_directories(SYSTEM ${MPI_INCLUDE_PATH})

set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fopenmp")

add_executable(OpenMP_MPI main.cpp)

target_link_libraries(OpenMP_MPI ${MPI_C_LIBRARIES})

对于linux，你应该使用下面的命令来构建和运行。

mkdir build && cd build && cmake .. && make && mpirun -n 2 ./OpenMP_MPI

对于 MacOS，只需将命令更改为

mkdir build && cd build && cmake -DCMAKE_CXX_COMPILER=g++-9 .. && make && mpirun -n 2 ./OpenMP_MPI

应该可以。（你可以去/usr/local/bin看看你的编译器是不是g++-9。）

如何将 OpenMP 和 MPI 导入大型 CLion CMake 项目？

How to import OpenMP and MPI to a large CLion CMake project?

c++

cmake

mpi

openmp

clion