为什么 CPU（使用 SKLearn）和 GPU（使用 RAPID）上的 RandomForestClassifier 得到不同的分数，非常不同？

Question

我在 CPU 上使用 RandomForestClassifier 和 SKLearn，在 GPU 上使用 RAPID。我正在这两个库之间做一个关于使用 Iris 数据集加速和评分的基准测试（这是一个尝试，将来我会改变数据集以获得更好的基准测试，我从这两个库开始）。

问题是当我在 CPU 上测量分数时总是得到 1.0 的值，但是当我尝试在 GPU 上测量分数时我得到一个介于 0.2 和 1.0 之间的变量值，我不明白为什么可能会发生。

首先，我使用的库版本是：

NumPy Version: 1.17.5
Pandas Version: 0.25.3
Scikit-Learn Version: 0.22.1
cuPY Version: 6.7.0
cuDF Version: 0.12.0
cuML Version: 0.12.0
Dask Version: 2.10.1
DaskCuda Version: 0+unknown
DaskCuDF Version: 0.12.0
MatPlotLib Version: 3.1.3
SeaBorn Version: 0.10.0

我用于 SKLearn RandomForestClassifier 的代码是：

# Read data in host memory
host_s_csv = pd.read_csv('./DataSet/iris.csv', header = 0, delimiter = ',') # Get complete CSV
host_s_data = host_s_csv.iloc[:, [0, 1, 2, 3]].astype('float32') # Get data columns
host_s_labels = host_s_csv.iloc[:, 4].astype('category').cat.codes # Get labels column

# Plot data
#sns.pairplot(host_s_csv, hue = 'variety');

# Split train and test data
host_s_data_train, host_s_data_test, host_s_labels_train, host_s_labels_test = sk_train_test_split(host_s_data, host_s_labels, test_size = 0.2, random_state = 0)

# Create RandomForest model
sk_s_random_forest = skRandomForestClassifier(n_estimators = 40,
                                             max_depth = 16,
                                             max_features = 1.0,
                                             random_state = 10, 
                                             n_jobs = 1)

# Fit data in RandomForest
sk_s_random_forest.fit(host_s_data_train, host_s_labels_train)

# Predict data
sk_s_random_forest_labels_predicted = sk_s_random_forest.predict(host_s_data_test)

# Check score
print('accuracy_score: ', sk_accuracy_score(host_s_labels_test, sk_s_random_forest_labels_predicted))

我用于 RAPIDs RandomForestClassifier 的代码是：

# Read data in device memory
device_s_csv = cudf.read_csv('./DataSet/iris.csv', header = 0, delimiter = ',') # Get complete CSV
device_s_data = device_s_csv.iloc[:, [0, 1, 2, 3]].astype('float32') # Get data columns
device_s_labels = device_s_csv.iloc[:, 4].astype('category').cat.codes # Get labels column

# Plot data
#sns.pairplot(device_s_csv.to_pandas(), hue = 'variety');

# Split train and test data
device_s_data_train, device_s_data_test, device_s_labels_train, device_s_labels_test = cu_train_test_split(device_s_data, device_s_labels, train_size = 0.8, shuffle = True, random_state = 0)

# Use same data as host
#device_s_data_train = cudf.DataFrame.from_pandas(host_s_data_train)
#device_s_data_test = cudf.DataFrame.from_pandas(host_s_data_test)
#device_s_labels_train = cudf.Series.from_pandas(host_s_labels_train).astype('int32')
#device_s_labels_test = cudf.Series.from_pandas(host_s_labels_test).astype('int32')

# Create RandomForest model
cu_s_random_forest = cusRandomForestClassifier(n_estimators = 40,
                                               max_depth = 16,
                                               max_features = 1.0,
                                               n_streams = 1)

# Fit data in RandomForest
cu_s_random_forest.fit(device_s_data_train, device_s_labels_train)

# Predict data
cu_s_random_forest_labels_predicted = cu_s_random_forest.predict(device_s_data_test)

# Check score
print('accuracy_score: ', cu_accuracy_score(device_s_labels_test, cu_s_random_forest_labels_predicted))

我正在使用的鸢尾花数据集示例是：

你知道为什么会这样吗？两个模型设置相等，参数相同，......我不知道为什么分数之间会有这么大的差异。

谢谢。

Answer 1

我从上面的示例中尝试了这个，将东西转换为 numpy 并且它有效

import numpy as np
train_label_np = host_s_labels_train.as_matrix().astype(np.int32)
train_data_np = host_s_data_train.as_matrix().astype(np.float32)
test_label_np = host_s_labels_test.as_matrix().astype(np.int32)
test_data_np = host_s_data_test.as_matrix().astype(np.float32)

cu_s_random_forest = cusRandomForestClassifier(n_estimators = 40,
                                           max_depth = 16, n_bins =16,
                                           max_features = 1.0,
                                           n_streams = 1)

# Fit data in RandomForest
cu_s_random_forest.fit(train_data_np,train_label_np)

# Predict data (GPU does not predict for multi-class at the moment. Fixed in 0.13)
predict_np = cu_s_random_forest.predict(test_data_np, predict_model='CPU')

# Check score
print('accuracy_score: ', sk_accuracy_score(test_label_np, predict_np))

Answer 2

这是由我们的预测代码中的一个已知问题引起的，该问题已在 0.13 中得到纠正并发出警告，并在 multi-class class 化时退回到 CPU。在 0.12 版中，我们没有警告或回退，因此，如果您不知道在多 class class 化上使用 predict_model="CPU'，您会得到一个[比你刚刚拟合的模型的预测分数低很多]。

在此处查看问题：https://github.com/rapidsai/cuml/issues/1623

这里有一些代码可以帮助您和其他人。它已经过修改，因此将来对其他人来说更容易一些。我在 GV100 和 RAPIDS 0.12 稳定版上得到 ~ 0.9333。

import cudf as cu
from cuml.ensemble import RandomForestClassifier as cusRandomForestClassifier
from cuml.metrics import accuracy_score as cu_accuracy_score
from cuml.preprocessing.model_selection import train_test_split as cu_train_test_split
import numpy as np

# data link: https://gist.githubusercontent.com/curran/a08a1080b88344b0c8a7/raw/639388c2cbc2120a14dcf466e85730eb8be498bb/iris.csv

# Read data
df = cu.read_csv('./iris.csv', header = 0, delimiter = ',') # Get complete CSV

# Prep data
X = df.iloc[:, [0, 1, 2, 3]].astype(np.float32) # Get data columns.  Must be float32 for our Classifier
y = df.iloc[:, 4].astype('category').cat.codes # Get labels column.  Will convert to int32

cu_s_random_forest = cusRandomForestClassifier(
                                           n_bins = 16, 
                                           n_estimators = 40,
                                           max_depth = 16,
                                           max_features = 1.0,
                                           n_streams = 1)

train_data, test_data, train_label, test_label = cu_train_test_split(X, y, train_size=0.8)

# Fit data in RandomForest
cu_s_random_forest.fit(train_data,train_label)

# Predict data
predict = cu_s_random_forest.predict(test_data, predict_model="CPU") # use CPU to do multi-class classifications
print(predict)

# Check score
print('accuracy_score: ', cu_accuracy_score(test_label, predict))

为什么 CPU（使用 SKLearn）和 GPU（使用 RAPID）上的 RandomForestClassifier 得到不同的分数，非常不同？

Why RandomForestClassifier on CPU (using SKLearn) and on GPU (using RAPIDs) get differents scores, very different?

python

random-forest

scikit-learn

rapids