vi 正则表达式：查找特定染色体及其包含 KSP 蛋白片段的片段
vi regex: Find specific chromosomes and their fragments containing KSP protein fragments
有一个蛋白质序列的fasta文件，想找到含有KSP三个氨基酸的2号或5号染色体。如何编写模式字符串。
下面是 fasta 文件的简要概述：
>AT1G05230.1
MFEPNMLLAAMNNADSNNHNYNHEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEME
. . . .
DFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIV
LNGGDPDYVALLPSGFAILPDGNANSGAPGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCET
A*
>AT1G05230.2
MFEPNMLLAAMNNADSNNHNYNHEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEME
. . . . . .
DFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIV
LNGGDPDYVALLPSGFAILPDGNANSGAPGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCET
A*
>AT2G35940.1
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
..........
....KSP......TNYHMNPNHNGDLEGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
..........
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT2G35940.2
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
................................................................................
RAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSAS
.....KSP..................EGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
................................................................................
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT3G03660.1
MDQEQTPHSPTRHSRSPPSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFY
................................................................................
VPLPTDEFGFLMHSLQHGEAYFLVPRQT*
>AT3G11260.1
MSFSVKGRSLRGNNNGGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARE
................................................................................
PYSSCGAEMEHPPPLDLRLSFL*
>AT3G61890.1
MEEGDFFNCCFSEISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRA
...KSP..........................................................................
RLDQGSVLCNDGDYNNNIKTEYFGFEEETDHELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS*
................................................................................
(lots of sequences)
................................................................................
>AT5G11060.1
MAFHNNHFNHFTDQQQHQPPPPPQQQQQQHFQESAPPNWLLRSDNNFLNLHTAASAAATSSDSPSSAAANQWLSRSSSFL
................................................................................
SVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRRSNAGENSGRDR*
>AT5G15150.1
MYMYEEERNNINNNQEGLRLEMAFPQHGFMFQQLHEDNAHHLPSPTSLPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHL
..KSP...........TTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL
QNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKREFAEASWSNNGSTENNHNNN
SSDANHVSMIKDLFPSSIRSATATTTSTHIDHQIVQDQDQGFCNMFNGIDETTSASYWAWPDQQQQHHNHHQFN*
首先我可以写匹配2号或5号染色体的模式串，比如>AT[25]G。
我这样写模式串（>AT[25]G.*KSP.*)匹配满足条件的序列失败了
顺便说一句，所有序列都以大于号>开始，以星号*结束，所有氨基酸都大写。
例如，预期结果将是 2 号和 5 号染色体上 KSP 所有三个氨基酸的序列
>AT2G35940.1
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
..........
....KSP......TNYHMNPNHNGDLEGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
..........
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT2G35940.2
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
................................................................................
RAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSAS
.....KSP..................EGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
................................................................................
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT5G15150.1
MYMYEEERNNINNNQEGLRLEMAFPQHGFMFQQLHEDNAHHLPSPTSLPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHL
..KSP...........TTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL
QNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKREFAEASWSNNGSTENNHNNN
SSDANHVSMIKDLFPSSIRSATATTTSTHIDHQIVQDQDQGFCNMFNGIDETTSASYWAWPDQQQQHHNHHQFN*
如何在vim中写正则表达式来匹配它们，希望大家能帮帮我，非常感谢大家看完我的问题
那是多行搜索。尝试类似以下内容并根据需要进行修改。我在匹配字符 类.
中包含换行符、制表符和字母数字
^>AT[25]G[\t\n[:alnum:].]*KSP[\t\n[:alnum:].]*\*$
有一个蛋白质序列的fasta文件，想找到含有KSP三个氨基酸的2号或5号染色体。如何编写模式字符串。
下面是 fasta 文件的简要概述：
>AT1G05230.1
MFEPNMLLAAMNNADSNNHNYNHEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEME
. . . .
DFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIV
LNGGDPDYVALLPSGFAILPDGNANSGAPGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCET
A*
>AT1G05230.2
MFEPNMLLAAMNNADSNNHNYNHEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGNDQDPLHPNKKKRYHRHTQLQIQEME
. . . . . .
DFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIV
LNGGDPDYVALLPSGFAILPDGNANSGAPGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCET
A*
>AT2G35940.1
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
..........
....KSP......TNYHMNPNHNGDLEGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
..........
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT2G35940.2
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
................................................................................
RAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSAS
.....KSP..................EGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
................................................................................
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT3G03660.1
MDQEQTPHSPTRHSRSPPSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFY
................................................................................
VPLPTDEFGFLMHSLQHGEAYFLVPRQT*
>AT3G11260.1
MSFSVKGRSLRGNNNGGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARE
................................................................................
PYSSCGAEMEHPPPLDLRLSFL*
>AT3G61890.1
MEEGDFFNCCFSEISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRA
...KSP..........................................................................
RLDQGSVLCNDGDYNNNIKTEYFGFEEETDHELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS*
................................................................................
(lots of sequences)
................................................................................
>AT5G11060.1
MAFHNNHFNHFTDQQQHQPPPPPQQQQQQHFQESAPPNWLLRSDNNFLNLHTAASAAATSSDSPSSAAANQWLSRSSSFL
................................................................................
SVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRRSNAGENSGRDR*
>AT5G15150.1
MYMYEEERNNINNNQEGLRLEMAFPQHGFMFQQLHEDNAHHLPSPTSLPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHL
..KSP...........TTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL
QNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKREFAEASWSNNGSTENNHNNN
SSDANHVSMIKDLFPSSIRSATATTTSTHIDHQIVQDQDQGFCNMFNGIDETTSASYWAWPDQQQQHHNHHQFN*
首先我可以写匹配2号或5号染色体的模式串，比如>AT[25]G。
我这样写模式串（>AT[25]G.*KSP.*)匹配满足条件的序列失败了
顺便说一句，所有序列都以大于号>开始，以星号*结束，所有氨基酸都大写。
例如，预期结果将是 2 号和 5 号染色体上 KSP 所有三个氨基酸的序列
>AT2G35940.1
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
..........
....KSP......TNYHMNPNHNGDLEGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
..........
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT2G35940.2
MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQ
................................................................................
RAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSAS
.....KSP..................EGVTGMQGSPKRLRTSDETMMQPINADFSSNEKLTMKILEERQGIRSDGGYPFM
................................................................................
NGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA*
>AT5G15150.1
MYMYEEERNNINNNQEGLRLEMAFPQHGFMFQQLHEDNAHHLPSPTSLPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHL
..KSP...........TTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL
QNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKREFAEASWSNNGSTENNHNNN
SSDANHVSMIKDLFPSSIRSATATTTSTHIDHQIVQDQDQGFCNMFNGIDETTSASYWAWPDQQQQHHNHHQFN*
如何在vim中写正则表达式来匹配它们，希望大家能帮帮我，非常感谢大家看完我的问题
那是多行搜索。尝试类似以下内容并根据需要进行修改。我在匹配字符 类.
中包含换行符、制表符和字母数字^>AT[25]G[\t\n[:alnum:].]*KSP[\t\n[:alnum:].]*\*$