在 dyn.load(文件,DLLpath = DLLpath,...)中安装“magick”时出错:无法加载共享对象
error installing ‘magick’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object
我正在使用 Fedora 32 和从源代码编译的 R 4.0.2。我无法安装 magick,但我需要它,因为它在很多包中都被用作依赖项。
我搜索了类似的问题,但在这种情况下答案不起作用。我可以毫无问题地安装 Rcpp、tidyverse (which)。我与 stringr 有类似的问题,我修复了它 [this][1](我用 2.4.0.tgz 尝试了这个解决方案,但我得到了同样的错误)。
> library(devtools)
Loading required package: usethis
> install_github("ropensci/magick", INSTALL_opts = "--no-lock")
Downloading GitHub repo ropensci/magick@master
✔ checking for file ‘/tmp/RtmpszRbzI/remotes771705a39e0da/ropensci-magick-0f18cd6/DESCRIPTION’ ...
─ preparing ‘magick’:
✔ checking DESCRIPTION meta-information ...
─ cleaning src
─ running ‘cleanup’
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ looking to see if a ‘data/datalist’ file should be added
─ building ‘magick_2.4.0.9000.tar.gz’
Installing package into ‘/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0’
(as ‘lib’ is unspecified)
* installing *source* package ‘magick’ ...
staged installation is only possible with locking
** using non-staged installation
Found pkg-config cflags and libs!
Using PKG_CFLAGS=-I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16
Using PKG_LIBS=-lMagick++-6.Q16 -lMagickWand-6.Q16 -lMagickCore-6.Q16
** libs
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c animation.cpp -o animation.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c attributes.cpp -o attributes.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base.cpp -o base.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c color.cpp -o color.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c composite.cpp -o composite.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.cc -o config.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c convolve.cpp -o convolve.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c device.cpp -o device.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c edges.cpp -o edges.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c edit.cpp -o edit.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fonts.cpp -o fonts.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c options.cpp -o options.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c properties.cpp -o properties.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c resize.cpp -o resize.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c segment.cpp -o segment.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transformations.cpp -o transformations.o
g++ -std=gnu++11 -shared -L/home/andrespara/4.0.2/lib64/R/lib -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,-rpath,/home/andrespara/anaconda3/lib -Wl,-rpath-link,/home/andrespara/anaconda3/lib -L/home/andrespara/anaconda3/lib -o magick.so RcppExports.o animation.o attributes.o base.o color.o composite.o config.o convolve.o device.o edges.o edit.o fonts.o options.o properties.o resize.o segment.o transformations.o -lMagick++-6.Q16 -lMagickWand-6.Q16 -lMagickCore-6.Q16 -L/home/andrespara/4.0.2/lib64/R/lib -lR
installing to /home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/magick/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Error: package or namespace load failed for ‘magick’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/magick/libs/magick.so':
/lib64/libraqm.so.0: undefined symbol: hb_buffer_set_invisible_glyph
Error: loading failed
Ejecución interrumpida
ERROR: loading failed
* removing ‘/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/magick’
Error: Failed to install 'magick' from GitHub:
(convertido del aviso) installation of package ‘/tmp/RtmpszRbzI/file771704f51e0f0/magick_2.4.0.9000.tar.gz’ had non-zero exit status
这是我安装 ImageMagick 的方式
(base) [andres] sudo dnf install ImageMagick-c++-devel
[sudo] password for andrespara:
Última comprobación de caducidad de metadatos hecha hace 0:54:23, el mar 07 jul 2020 12:53:15.
Dependencias resueltas.
=======================================================================================
Paquete Arq. Versión Repositorio Tam.
=======================================================================================
Instalando:
ImageMagick-c++-devel x86_64 1:6.9.10.86-2.fc32 fedora 92 k
Instalando dependencias:
ImageMagick x86_64 1:6.9.10.86-2.fc32 fedora 160 k
ImageMagick-c++ x86_64 1:6.9.10.86-2.fc32 fedora 184 k
ImageMagick-devel x86_64 1:6.9.10.86-2.fc32 fedora 93 k
ImageMagick-libs x86_64 1:6.9.10.86-2.fc32 fedora 2.3 M
OpenEXR-devel x86_64 2.3.0-5.fc32 fedora 76 k
gl-manpages noarch 1.1-20.20190306.fc32 fedora 1.0 M
ilmbase-devel x86_64 2.3.0-4.fc32 fedora 85 k
jasper-devel x86_64 2.0.16-2.fc32 fedora 396 k
lcms2-devel x86_64 2.9-7.fc32 fedora 6.1 M
libgs-devel x86_64 9.52-3.fc32 updates 19 k
liblqr-1 x86_64 0.4.2-14.fc32 fedora 50 k
mesa-libGLU x86_64 9.0.1-2.fc32 fedora 190 k
mesa-libGLU-devel x86_64 9.0.1-2.fc32 fedora 13 k
Resumen de la transacción
=======================================================================================
Instalar 14 Paquetes
Tamaño total de la descarga: 11 M
Tamaño instalado: 21 M
¿Está de acuerdo [s/N]?: y
Descargando paquetes:
(1/14): libgs-devel-9.52-3.fc32.x86_64.rpm 109 kB/s | 19 kB 00:00
(2/14): ImageMagick-c++-6.9.10.86-2.fc32.x86_64.rpm 605 kB/s | 184 kB 00:00
(3/14): ImageMagick-6.9.10.86-2.fc32.x86_64.rpm 468 kB/s | 160 kB 00:00
(4/14): ImageMagick-c++-devel-6.9.10.86-2.fc32.x86_64. 542 kB/s | 92 kB 00:00
(5/14): ImageMagick-devel-6.9.10.86-2.fc32.x86_64.rpm 1.2 MB/s | 93 kB 00:00
(6/14): OpenEXR-devel-2.3.0-5.fc32.x86_64.rpm 522 kB/s | 76 kB 00:00
(7/14): ilmbase-devel-2.3.0-4.fc32.x86_64.rpm 611 kB/s | 85 kB 00:00
(8/14): jasper-devel-2.0.16-2.fc32.x86_64.rpm 793 kB/s | 396 kB 00:00
(9/14): gl-manpages-1.1-20.20190306.fc32.noarch.rpm 1.1 MB/s | 1.0 MB 00:00
(10/14): liblqr-1-0.4.2-14.fc32.x86_64.rpm 641 kB/s | 50 kB 00:00
(11/14): mesa-libGLU-9.0.1-2.fc32.x86_64.rpm 511 kB/s | 190 kB 00:00
(12/14): mesa-libGLU-devel-9.0.1-2.fc32.x86_64.rpm 185 kB/s | 13 kB 00:00
(13/14): ImageMagick-libs-6.9.10.86-2.fc32.x86_64.rpm 591 kB/s | 2.3 MB 00:03
(14/14): lcms2-devel-2.9-7.fc32.x86_64.rpm 820 kB/s | 6.1 MB 00:07
---------------------------------------------------------------------------------------
Total 1.0 MB/s | 11 MB 00:11
Ejecutando verificación de operación
Verificación de operación exitosa.
Ejecutando prueba de operaciones
Prueba de operación exitosa.
Ejecutando operación
Preparando : 1/1
Instalando : liblqr-1-0.4.2-14.fc32.x86_64 1/14
Instalando : ImageMagick-libs-1:6.9.10.86-2.fc32.x86_64 2/14
Instalando : ImageMagick-1:6.9.10.86-2.fc32.x86_64 3/14
Instalando : ImageMagick-c++-1:6.9.10.86-2.fc32.x86_64 4/14
Instalando : mesa-libGLU-9.0.1-2.fc32.x86_64 5/14
Instalando : lcms2-devel-2.9-7.fc32.x86_64 6/14
Instalando : jasper-devel-2.0.16-2.fc32.x86_64 7/14
Instalando : gl-manpages-1.1-20.20190306.fc32.noarch 8/14
Instalando : mesa-libGLU-devel-9.0.1-2.fc32.x86_64 9/14
Instalando : ilmbase-devel-2.3.0-4.fc32.x86_64 10/14
Instalando : OpenEXR-devel-2.3.0-5.fc32.x86_64 11/14
Instalando : libgs-devel-9.52-3.fc32.x86_64 12/14
Instalando : ImageMagick-devel-1:6.9.10.86-2.fc32.x86_64 13/14
Instalando : ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64 14/14
Ejecutando scriptlet: ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64 14/14
Verificando : libgs-devel-9.52-3.fc32.x86_64 1/14
Verificando : ImageMagick-1:6.9.10.86-2.fc32.x86_64 2/14
Verificando : ImageMagick-c++-1:6.9.10.86-2.fc32.x86_64 3/14
Verificando : ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64 4/14
Verificando : ImageMagick-devel-1:6.9.10.86-2.fc32.x86_64 5/14
Verificando : ImageMagick-libs-1:6.9.10.86-2.fc32.x86_64 6/14
Verificando : OpenEXR-devel-2.3.0-5.fc32.x86_64 7/14
Verificando : gl-manpages-1.1-20.20190306.fc32.noarch 8/14
Verificando : ilmbase-devel-2.3.0-4.fc32.x86_64 9/14
Verificando : jasper-devel-2.0.16-2.fc32.x86_64 10/14
Verificando : lcms2-devel-2.9-7.fc32.x86_64 11/14
Verificando : liblqr-1-0.4.2-14.fc32.x86_64 12/14
Verificando : mesa-libGLU-9.0.1-2.fc32.x86_64 13/14
Verificando : mesa-libGLU-devel-9.0.1-2.fc32.x86_64 14/14
Instalado:
ImageMagick-1:6.9.10.86-2.fc32.x86_64
ImageMagick-c++-1:6.9.10.86-2.fc32.x86_64
ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64
ImageMagick-devel-1:6.9.10.86-2.fc32.x86_64
ImageMagick-libs-1:6.9.10.86-2.fc32.x86_64
OpenEXR-devel-2.3.0-5.fc32.x86_64
gl-manpages-1.1-20.20190306.fc32.noarch
ilmbase-devel-2.3.0-4.fc32.x86_64
jasper-devel-2.0.16-2.fc32.x86_64
lcms2-devel-2.9-7.fc32.x86_64
libgs-devel-9.52-3.fc32.x86_64
liblqr-1-0.4.2-14.fc32.x86_64
mesa-libGLU-9.0.1-2.fc32.x86_64
mesa-libGLU-devel-9.0.1-2.fc32.x86_64
我无法为此下载 rpm,出现此错误:
wget https://fedora.pkgs.org/32/fedora-x86_64/ImageMagick-c++-devel-6.9.10.86-2.fc32.x86_64.rpm.html
--2020-07-07 14:06:29-- https://fedora.pkgs.org/32/fedora-x86_64/ImageMagick-c++-devel-6.9.10.86-2.fc32.x86_64.rpm.html
Resolviendo fedora.pkgs.org (fedora.pkgs.org)... 46.4.72.43
Conectando con fedora.pkgs.org (fedora.pkgs.org)[46.4.72.43]:443... conectado.
Petición HTTP enviada, esperando respuesta... 403 Forbidden
2020-07-07 14:06:30 ERROR 403: Forbidden.
抱歉,如果之前有人问过这个问题,但我正在循环尝试很多解决方案,其中 none 个都有效。谢谢。
这里是 sessionInfo()
> sessionInfo()
R version 4.0.2 (2020-06-22)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Generic 32 (Generic)
Matrix products: default
BLAS/LAPACK: /usr/lib64/libopenblas-r0.3.9.so
locale:
[1] LC_CTYPE=es_UY.UTF-8 LC_NUMERIC=C
[3] LC_TIME=es_UY.UTF-8 LC_COLLATE=es_UY.UTF-8
[5] LC_MONETARY=es_UY.UTF-8 LC_MESSAGES=es_UY.UTF-8
[7] LC_PAPER=es_UY.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=es_UY.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] devtools_2.3.0.9000 usethis_1.6.1
loaded via a namespace (and not attached):
[1] magrittr_1.5 pkgload_1.1.0 R6_2.4.1 rlang_0.4.6
[5] fansi_0.4.1 tools_4.0.2 pkgbuild_1.0.8 sessioninfo_1.1.1
[9] cli_2.0.2 withr_2.2.0 ellipsis_0.3.1 remotes_2.1.1
[13] assertthat_0.2.1 digest_0.6.25 rprojroot_1.3-2 crayon_1.3.4
[17] processx_3.4.3 callr_3.4.3 fs_1.4.2 ps_1.3.3
[21] curl_4.3 testthat_2.3.2 memoise_1.1.0 glue_1.4.1
[25] compiler_4.0.2 desc_1.2.0 backports_1.1.8 prettyunits_1.1.1
[1]:
发布或安装似乎有些奇怪,我下载了补丁版本 4.0.2 form here and I followed these instructions [就像我以前做的那样!] 并且它有效(看起来它 compiled/installed 使用 install.packages
.
时没有额外的参数,虽然我没有测量它,但一切都稍微快一点
我正在使用 Fedora 32 和从源代码编译的 R 4.0.2。我无法安装 magick,但我需要它,因为它在很多包中都被用作依赖项。 我搜索了类似的问题,但在这种情况下答案不起作用。我可以毫无问题地安装 Rcpp、tidyverse (which)。我与 stringr 有类似的问题,我修复了它 [this][1](我用 2.4.0.tgz 尝试了这个解决方案,但我得到了同样的错误)。
> library(devtools)
Loading required package: usethis
> install_github("ropensci/magick", INSTALL_opts = "--no-lock")
Downloading GitHub repo ropensci/magick@master
✔ checking for file ‘/tmp/RtmpszRbzI/remotes771705a39e0da/ropensci-magick-0f18cd6/DESCRIPTION’ ...
─ preparing ‘magick’:
✔ checking DESCRIPTION meta-information ...
─ cleaning src
─ running ‘cleanup’
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ looking to see if a ‘data/datalist’ file should be added
─ building ‘magick_2.4.0.9000.tar.gz’
Installing package into ‘/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0’
(as ‘lib’ is unspecified)
* installing *source* package ‘magick’ ...
staged installation is only possible with locking
** using non-staged installation
Found pkg-config cflags and libs!
Using PKG_CFLAGS=-I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16
Using PKG_LIBS=-lMagick++-6.Q16 -lMagickWand-6.Q16 -lMagickCore-6.Q16
** libs
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c animation.cpp -o animation.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c attributes.cpp -o attributes.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base.cpp -o base.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c color.cpp -o color.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c composite.cpp -o composite.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.cc -o config.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c convolve.cpp -o convolve.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c device.cpp -o device.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c edges.cpp -o edges.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c edit.cpp -o edit.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fonts.cpp -o fonts.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c options.cpp -o options.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c properties.cpp -o properties.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c resize.cpp -o resize.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c segment.cpp -o segment.o
g++ -std=gnu++11 -I"/home/andrespara/4.0.2/lib64/R/include" -DNDEBUG -I/usr/include/ImageMagick-6 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -I'/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transformations.cpp -o transformations.o
g++ -std=gnu++11 -shared -L/home/andrespara/4.0.2/lib64/R/lib -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,-rpath,/home/andrespara/anaconda3/lib -Wl,-rpath-link,/home/andrespara/anaconda3/lib -L/home/andrespara/anaconda3/lib -o magick.so RcppExports.o animation.o attributes.o base.o color.o composite.o config.o convolve.o device.o edges.o edit.o fonts.o options.o properties.o resize.o segment.o transformations.o -lMagick++-6.Q16 -lMagickWand-6.Q16 -lMagickCore-6.Q16 -L/home/andrespara/4.0.2/lib64/R/lib -lR
installing to /home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/magick/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Error: package or namespace load failed for ‘magick’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/magick/libs/magick.so':
/lib64/libraqm.so.0: undefined symbol: hb_buffer_set_invisible_glyph
Error: loading failed
Ejecución interrumpida
ERROR: loading failed
* removing ‘/home/andrespara/R/x86_64-pc-linux-gnu-library/4.0/magick’
Error: Failed to install 'magick' from GitHub:
(convertido del aviso) installation of package ‘/tmp/RtmpszRbzI/file771704f51e0f0/magick_2.4.0.9000.tar.gz’ had non-zero exit status
这是我安装 ImageMagick 的方式
(base) [andres] sudo dnf install ImageMagick-c++-devel
[sudo] password for andrespara:
Última comprobación de caducidad de metadatos hecha hace 0:54:23, el mar 07 jul 2020 12:53:15.
Dependencias resueltas.
=======================================================================================
Paquete Arq. Versión Repositorio Tam.
=======================================================================================
Instalando:
ImageMagick-c++-devel x86_64 1:6.9.10.86-2.fc32 fedora 92 k
Instalando dependencias:
ImageMagick x86_64 1:6.9.10.86-2.fc32 fedora 160 k
ImageMagick-c++ x86_64 1:6.9.10.86-2.fc32 fedora 184 k
ImageMagick-devel x86_64 1:6.9.10.86-2.fc32 fedora 93 k
ImageMagick-libs x86_64 1:6.9.10.86-2.fc32 fedora 2.3 M
OpenEXR-devel x86_64 2.3.0-5.fc32 fedora 76 k
gl-manpages noarch 1.1-20.20190306.fc32 fedora 1.0 M
ilmbase-devel x86_64 2.3.0-4.fc32 fedora 85 k
jasper-devel x86_64 2.0.16-2.fc32 fedora 396 k
lcms2-devel x86_64 2.9-7.fc32 fedora 6.1 M
libgs-devel x86_64 9.52-3.fc32 updates 19 k
liblqr-1 x86_64 0.4.2-14.fc32 fedora 50 k
mesa-libGLU x86_64 9.0.1-2.fc32 fedora 190 k
mesa-libGLU-devel x86_64 9.0.1-2.fc32 fedora 13 k
Resumen de la transacción
=======================================================================================
Instalar 14 Paquetes
Tamaño total de la descarga: 11 M
Tamaño instalado: 21 M
¿Está de acuerdo [s/N]?: y
Descargando paquetes:
(1/14): libgs-devel-9.52-3.fc32.x86_64.rpm 109 kB/s | 19 kB 00:00
(2/14): ImageMagick-c++-6.9.10.86-2.fc32.x86_64.rpm 605 kB/s | 184 kB 00:00
(3/14): ImageMagick-6.9.10.86-2.fc32.x86_64.rpm 468 kB/s | 160 kB 00:00
(4/14): ImageMagick-c++-devel-6.9.10.86-2.fc32.x86_64. 542 kB/s | 92 kB 00:00
(5/14): ImageMagick-devel-6.9.10.86-2.fc32.x86_64.rpm 1.2 MB/s | 93 kB 00:00
(6/14): OpenEXR-devel-2.3.0-5.fc32.x86_64.rpm 522 kB/s | 76 kB 00:00
(7/14): ilmbase-devel-2.3.0-4.fc32.x86_64.rpm 611 kB/s | 85 kB 00:00
(8/14): jasper-devel-2.0.16-2.fc32.x86_64.rpm 793 kB/s | 396 kB 00:00
(9/14): gl-manpages-1.1-20.20190306.fc32.noarch.rpm 1.1 MB/s | 1.0 MB 00:00
(10/14): liblqr-1-0.4.2-14.fc32.x86_64.rpm 641 kB/s | 50 kB 00:00
(11/14): mesa-libGLU-9.0.1-2.fc32.x86_64.rpm 511 kB/s | 190 kB 00:00
(12/14): mesa-libGLU-devel-9.0.1-2.fc32.x86_64.rpm 185 kB/s | 13 kB 00:00
(13/14): ImageMagick-libs-6.9.10.86-2.fc32.x86_64.rpm 591 kB/s | 2.3 MB 00:03
(14/14): lcms2-devel-2.9-7.fc32.x86_64.rpm 820 kB/s | 6.1 MB 00:07
---------------------------------------------------------------------------------------
Total 1.0 MB/s | 11 MB 00:11
Ejecutando verificación de operación
Verificación de operación exitosa.
Ejecutando prueba de operaciones
Prueba de operación exitosa.
Ejecutando operación
Preparando : 1/1
Instalando : liblqr-1-0.4.2-14.fc32.x86_64 1/14
Instalando : ImageMagick-libs-1:6.9.10.86-2.fc32.x86_64 2/14
Instalando : ImageMagick-1:6.9.10.86-2.fc32.x86_64 3/14
Instalando : ImageMagick-c++-1:6.9.10.86-2.fc32.x86_64 4/14
Instalando : mesa-libGLU-9.0.1-2.fc32.x86_64 5/14
Instalando : lcms2-devel-2.9-7.fc32.x86_64 6/14
Instalando : jasper-devel-2.0.16-2.fc32.x86_64 7/14
Instalando : gl-manpages-1.1-20.20190306.fc32.noarch 8/14
Instalando : mesa-libGLU-devel-9.0.1-2.fc32.x86_64 9/14
Instalando : ilmbase-devel-2.3.0-4.fc32.x86_64 10/14
Instalando : OpenEXR-devel-2.3.0-5.fc32.x86_64 11/14
Instalando : libgs-devel-9.52-3.fc32.x86_64 12/14
Instalando : ImageMagick-devel-1:6.9.10.86-2.fc32.x86_64 13/14
Instalando : ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64 14/14
Ejecutando scriptlet: ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64 14/14
Verificando : libgs-devel-9.52-3.fc32.x86_64 1/14
Verificando : ImageMagick-1:6.9.10.86-2.fc32.x86_64 2/14
Verificando : ImageMagick-c++-1:6.9.10.86-2.fc32.x86_64 3/14
Verificando : ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64 4/14
Verificando : ImageMagick-devel-1:6.9.10.86-2.fc32.x86_64 5/14
Verificando : ImageMagick-libs-1:6.9.10.86-2.fc32.x86_64 6/14
Verificando : OpenEXR-devel-2.3.0-5.fc32.x86_64 7/14
Verificando : gl-manpages-1.1-20.20190306.fc32.noarch 8/14
Verificando : ilmbase-devel-2.3.0-4.fc32.x86_64 9/14
Verificando : jasper-devel-2.0.16-2.fc32.x86_64 10/14
Verificando : lcms2-devel-2.9-7.fc32.x86_64 11/14
Verificando : liblqr-1-0.4.2-14.fc32.x86_64 12/14
Verificando : mesa-libGLU-9.0.1-2.fc32.x86_64 13/14
Verificando : mesa-libGLU-devel-9.0.1-2.fc32.x86_64 14/14
Instalado:
ImageMagick-1:6.9.10.86-2.fc32.x86_64
ImageMagick-c++-1:6.9.10.86-2.fc32.x86_64
ImageMagick-c++-devel-1:6.9.10.86-2.fc32.x86_64
ImageMagick-devel-1:6.9.10.86-2.fc32.x86_64
ImageMagick-libs-1:6.9.10.86-2.fc32.x86_64
OpenEXR-devel-2.3.0-5.fc32.x86_64
gl-manpages-1.1-20.20190306.fc32.noarch
ilmbase-devel-2.3.0-4.fc32.x86_64
jasper-devel-2.0.16-2.fc32.x86_64
lcms2-devel-2.9-7.fc32.x86_64
libgs-devel-9.52-3.fc32.x86_64
liblqr-1-0.4.2-14.fc32.x86_64
mesa-libGLU-9.0.1-2.fc32.x86_64
mesa-libGLU-devel-9.0.1-2.fc32.x86_64
我无法为此下载 rpm,出现此错误:
wget https://fedora.pkgs.org/32/fedora-x86_64/ImageMagick-c++-devel-6.9.10.86-2.fc32.x86_64.rpm.html
--2020-07-07 14:06:29-- https://fedora.pkgs.org/32/fedora-x86_64/ImageMagick-c++-devel-6.9.10.86-2.fc32.x86_64.rpm.html
Resolviendo fedora.pkgs.org (fedora.pkgs.org)... 46.4.72.43
Conectando con fedora.pkgs.org (fedora.pkgs.org)[46.4.72.43]:443... conectado.
Petición HTTP enviada, esperando respuesta... 403 Forbidden
2020-07-07 14:06:30 ERROR 403: Forbidden.
抱歉,如果之前有人问过这个问题,但我正在循环尝试很多解决方案,其中 none 个都有效。谢谢。
这里是 sessionInfo()
> sessionInfo()
R version 4.0.2 (2020-06-22)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Generic 32 (Generic)
Matrix products: default
BLAS/LAPACK: /usr/lib64/libopenblas-r0.3.9.so
locale:
[1] LC_CTYPE=es_UY.UTF-8 LC_NUMERIC=C
[3] LC_TIME=es_UY.UTF-8 LC_COLLATE=es_UY.UTF-8
[5] LC_MONETARY=es_UY.UTF-8 LC_MESSAGES=es_UY.UTF-8
[7] LC_PAPER=es_UY.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=es_UY.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] devtools_2.3.0.9000 usethis_1.6.1
loaded via a namespace (and not attached):
[1] magrittr_1.5 pkgload_1.1.0 R6_2.4.1 rlang_0.4.6
[5] fansi_0.4.1 tools_4.0.2 pkgbuild_1.0.8 sessioninfo_1.1.1
[9] cli_2.0.2 withr_2.2.0 ellipsis_0.3.1 remotes_2.1.1
[13] assertthat_0.2.1 digest_0.6.25 rprojroot_1.3-2 crayon_1.3.4
[17] processx_3.4.3 callr_3.4.3 fs_1.4.2 ps_1.3.3
[21] curl_4.3 testthat_2.3.2 memoise_1.1.0 glue_1.4.1
[25] compiler_4.0.2 desc_1.2.0 backports_1.1.8 prettyunits_1.1.1
[1]:
发布或安装似乎有些奇怪,我下载了补丁版本 4.0.2 form here and I followed these instructions [就像我以前做的那样!] 并且它有效(看起来它 compiled/installed 使用 install.packages
.