删除空数据空间并在分组条形图中保留统一的条宽。在 ggplot2 中使用小平面网格

Removing the empty data spaces and retaining the uniform bar width in grouped bar chart. Using facet grid in ggplot2

以下是我用来绘制分组条形图的代码: 如果我使用

,我能够保持统一的条宽但无法删除丢失数据的空白区域
geom_bar(stat="identity",position=position_dodge(preserve = "single"),na.rm = TRUE,width = 0.9). 

如果我不使用上述命令,尽管我可以删除空格,但我无法保留条形宽度。

library(ggplot2)
library(reshape2)
library(readxl)
df <- read_excel("Documents/Analysis.xlsx")

ggplot(data = df, aes(x = Cell_type, y = Percentage_of_cell, fill = Sample_id, na.rm = TRUE),
       position = position_dodge(preserve = "single", padding = 0)) + 
  geom_bar(stat = "identity", position = position_dodge(preserve = "single"), na.rm = TRUE, width = 0.9)+
  theme_bw() +
  scale_fill_manual(values=c("darkgoldenrod3","darkolivegreen"))+
  theme(axis.text.x = element_blank(), 
        axis.text.y = element_text(color="black", angle = 90, hjust = 1, size = 12, face = "bold"), 
        axis.title.y = element_text( size = 12, angle = 90, hjust = .5, vjust = .5, face = "bold"),
        legend.text = element_text(size = 12, face = "bold"),
        axis.ticks.x = element_blank())+
  labs(fill="") + 
  xlab("") +
  ylab("% of Cell_type\n") + 
  facet_grid(~Cell_type), 
             scales = "free_x", space = "free_x")+
  theme(plot.margin = unit(c(1,1,1.5,1.2),"cm"))+ 
  theme(strip.text = element_text(colour = 'black', face="bold", size=11))+
  theme(legend.position = "bottom")

这是 df:

Sample_id Cell_type Percentage_of_cell   
Sample1 Cell1   4.701222662  
Sample2 Cell1   0.829875519  
Sample2 Cell2   5.526216522  
Sample1 Cell3   1.980368521  
Sample2 Cell3   20.50169747  
Sample1 Cell4   22.75701739  
Sample2 Cell4   21.3504338  
Sample1 Cell5   15.00774927  
Sample2 Cell5   9.430403621  
Sample1 Cell6   7.465128293  
Sample1 Cell7   0.602720854  
Sample2 Cell7   1.772915881  
Sample1 Cell8   44.07611503  
Sample2 Cell8   40.58845719  
Sample1 Unassigned  3.409677975  

我是R的新手,请帮忙指出我哪里出错了,或者是否有其他解决这个问题的方法。

这是您要找的吗?

请注意:

  • xaes 现在是 Sampl_id
  • position_dodge 已删除
  • 如果你需要 stat=identity
  • geom_colgeom_bar 更简洁
  • themelab现在都在一起了
  • scalesfacet_grid 中的 space 现在可以正常工作了
ggplot(data = df, aes(x = Sample_id, y = Percentage_of_cell, fill = Sample_id)) +
 geom_col(width = 0.9) +
 facet_grid(cols = vars(Cell_type), 
            labeller = label_wrap_gen(width = 16,multi_line = TRUE), 
            scales="free", space = "free") +
 labs(x = "", y = "% of Cell_type\n", fill = "") +
 scale_fill_manual(values = c("darkgoldenrod3", "darkolivegreen")) +
 theme_bw() +
 theme(axis.text.x  = element_blank(), 
       axis.text.y  = element_text(color = "black", angle = 90, hjust = 1, size = 12, face = "bold"), 
       axis.title.y = element_text(size = 12, angle = 90, hjust = 0.5, vjust = 0.5, face = "bold"),
       legend.text  = element_text(size = 12, face = "bold"),
       axis.ticks.x = element_blank(),
       plot.margin  = unit(c(1,1,1.5,1.2),"cm"),
       strip.text   = element_text(colour = 'black', face = "bold", size = 11),
       legend.position = "bottom")