openfoam openmpi error: libmpi.so.0 not found
openfoam openmpi error: libmpi.so.0 not found
每当我尝试在 openfoam 中编译求解器时,我都会收到错误消息:
/usr/bin/ld: warning: libmpi.so.0, needed by /opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libopen-rte.so.0, needed by /opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libopen-pal.so.0, needed by /opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so, not found (try using -rpath or -rpath-link)
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Waitall'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Abort'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_double'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Get_count'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Init'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Probe'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Send'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Allreduce'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_packed'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Buffer_detach'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Bsend'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_byte'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Irecv'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Recv'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_comm_world'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Get_processor_name'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Test'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Isend'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Finalize'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_op_sum'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Buffer_attach'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Comm_size'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Comm_rank'
collect2: error: ld returned 1 exit status
我猜问题出在open-mpi的安装上。我怎样才能 check/fix 错误?
首先,检查您是否确实安装了 Open MPI。
其次,检查 OpenFOAM 是否正确设置为使用 Open MPI:请参阅 etc/bashrc
(或 etc/cshrc
)中的相应选项。还要确保您已经为 Open MPI 设置了任何需要的环境变量(我没有任何使用 Open MPI 的经验,我使用 Intel MPI 构建,并且有一些环境变量需要通过手动调用一些脚本来设置)。
第三,检查 wmake
发出的 link 命令行来构建你的求解器, 和 来构建 libPstream
(在主要过程中OpenFOAM 构建过程)。如果它不打印 link 行,请编辑 wmake/Makefile
以使其打印出来。其中一些行(我认为 libPstream
的)应该具有一些 link 选项和最有可能与 Open MPI 相关的路径。
每当我尝试在 openfoam 中编译求解器时,我都会收到错误消息:
/usr/bin/ld: warning: libmpi.so.0, needed by /opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libopen-rte.so.0, needed by /opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libopen-pal.so.0, needed by /opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so, not found (try using -rpath or -rpath-link)
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Waitall'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Abort'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_double'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Get_count'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Init'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Probe'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Send'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Allreduce'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_packed'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Buffer_detach'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Bsend'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_byte'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Irecv'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Recv'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_comm_world'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Get_processor_name'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Test'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Isend'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Finalize'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `ompi_mpi_op_sum'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Buffer_attach'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Comm_size'
/opt/openfoam211/platforms/linux64GccDPOpt/lib/openmpi-system/libPstream.so: undefined reference to `MPI_Comm_rank'
collect2: error: ld returned 1 exit status
我猜问题出在open-mpi的安装上。我怎样才能 check/fix 错误?
首先,检查您是否确实安装了 Open MPI。
其次,检查 OpenFOAM 是否正确设置为使用 Open MPI:请参阅 etc/bashrc
(或 etc/cshrc
)中的相应选项。还要确保您已经为 Open MPI 设置了任何需要的环境变量(我没有任何使用 Open MPI 的经验,我使用 Intel MPI 构建,并且有一些环境变量需要通过手动调用一些脚本来设置)。
第三,检查 wmake
发出的 link 命令行来构建你的求解器, 和 来构建 libPstream
(在主要过程中OpenFOAM 构建过程)。如果它不打印 link 行,请编辑 wmake/Makefile
以使其打印出来。其中一些行(我认为 libPstream
的)应该具有一些 link 选项和最有可能与 Open MPI 相关的路径。