github 操作找不到我的 R 包的文件
github action cannot find the files of my R package
我正在尝试获取 Github 操作来检查我的包裹。这些包在我的电脑上编译得很好(甚至没有注释)。我创建了一个 yaml 脚本以使用 usethis::use_github_action_check_standard()
进入 github 工作流目录,但它失败并出现一堆警告,例如
No files were found with the provided path: check. No artifacts will
be uploaded.
路径检查是rcmdcheck
创建的用于存放文件的临时目录。所以,我认为这是与此命令相关的问题。但是一切都是由 usethis 实用程序创建的,似乎没有其他人有同样的问题。
我环顾四周,最后尝试的修复是手动添加一个步骤来安装导入和建议的包,如 中所建议的那样,但无济于事。
我做错了什么?提前致谢。
yaml 脚本是
on:
push:
branches:
- master
pull_request:
branches:
- master
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: windows-latest, r: 'release'}
- {os: macOS-latest, r: 'release'}
- {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
- {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@v1
with:
r-version: ${{ matrix.config.r }}
- uses: r-lib/actions/setup-pandoc@v1
- name: Install dependencies
run: |
install.packages(c("geigen","stringr", "leaps", "stats"),dependencies=TRUE)
install.packages(c("elasticnet","glmnet"),dependencies=TRUE)
shell: Rscript {0}
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install system dependencies
if: runner.os == 'Linux'
run: |
while read -r cmd
do
eval sudo $cmd
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}
- name: Check
env:
_R_CHECK_CRAN_INCOMING_REMOTE_: false
run: |
options(crayon.enabled = TRUE)
rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}
- name: Upload check results
if: failure()
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check
我通过将所有内容移动到主分支来解决问题。
我正在尝试获取 Github 操作来检查我的包裹。这些包在我的电脑上编译得很好(甚至没有注释)。我创建了一个 yaml 脚本以使用 usethis::use_github_action_check_standard()
进入 github 工作流目录,但它失败并出现一堆警告,例如
No files were found with the provided path: check. No artifacts will be uploaded.
路径检查是rcmdcheck
创建的用于存放文件的临时目录。所以,我认为这是与此命令相关的问题。但是一切都是由 usethis 实用程序创建的,似乎没有其他人有同样的问题。
我环顾四周,最后尝试的修复是手动添加一个步骤来安装导入和建议的包,如
我做错了什么?提前致谢。
yaml 脚本是
on:
push:
branches:
- master
pull_request:
branches:
- master
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: windows-latest, r: 'release'}
- {os: macOS-latest, r: 'release'}
- {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
- {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@v1
with:
r-version: ${{ matrix.config.r }}
- uses: r-lib/actions/setup-pandoc@v1
- name: Install dependencies
run: |
install.packages(c("geigen","stringr", "leaps", "stats"),dependencies=TRUE)
install.packages(c("elasticnet","glmnet"),dependencies=TRUE)
shell: Rscript {0}
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install system dependencies
if: runner.os == 'Linux'
run: |
while read -r cmd
do
eval sudo $cmd
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}
- name: Check
env:
_R_CHECK_CRAN_INCOMING_REMOTE_: false
run: |
options(crayon.enabled = TRUE)
rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}
- name: Upload check results
if: failure()
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check
我通过将所有内容移动到主分支来解决问题。