cuda Thrust如何获取与键关联的值

Question

我在一侧得到了一个 values/keys 列表，在另一侧我得到了一个键列表。

我想获取列表中此键列表的关联值。

这是我的伪代码

我不知道如何做我的谓词，顺便说一句，这是否是实现我目标的好方法。

void pseudoCode()
{
    const int N = 7;
    thrust::device_vector<vec3> keys1(N);

    values[0] = vec3(1.01,1.01,1.0156); 
    values[1] = vec3(1.01,1.01,1.01561);
    values[2] = vec3(1.02,1.52,1.02); 
    values[3] = vec3(1.02,1.52,1.02); 
    values[4] = vec3(1.0,1.0,1.0); 
    values[5] = vec3(5.0,1.0,1.0); 
    values[6] = vec3(5.0,1.5,1.0); 
  
    thrust::device_vector<long> values(N);
    keys1[0] = 0; 
    keys1[1] = 1;
    keys1[2] = 2;
    keys1[3] = 5;
    keys1[4] = 9;
    keys1[5] = 19;
    keys1[6] = 22;

    thrust::device_vector<long> to_find(6);
    to_find[0] = 1; 
    to_find[1] = 5;
    to_find[2] = 9;
    
    thrust::device_vector<vec3> output(6);

    auto begin = thrust::make_zip_iterator(thrust::make_tuple(keys1.begin(), values.begin()));
    auto end = thrust::make_zip_iterator(thrust::make_tuple(keys1.end(), values.end()));


    thrust::copy_if(begin, end, output, pred(to_find));

    // result 

    output[0]=values[1];
    output[1]=values[3];
    output[2]=values[4];
    

}

我试着让我的谓词在这里是我的代码

struct FindValue
{
    thrust::device_vector<long>  ToFind;
    explicit FindValue(thrust::device_vector<long> toFind) : ToFind{toFind} {}

    __host__ __device__
    bool operator()(thrust::tuple<vec3, long> x)
    {
        long v = thrust::get<1>(x);
        size_t N = ToFind.size(); 
        for (size_t index=0; index<N; index++)
        {
            if (v==ToFind[index]) return true;
        }   
        return false;
    }
};

并更改 copy_if

的调用

thrust::copy_if(begin, end, output, FindValue(to_find));

但我收到了错误

/usr/local/cuda/bin/../targets/x86_64-linux/include/thrust/detail/copy_if.inl(75): error: class "thrust::iterator_system<thrust::device_vector<vec3, thrust::device_allocator<vec3>>>" has no member "type"
          detected during instantiation of "OutputIterator thrust::copy_if(InputIterator, InputIterator, OutputIterator, Predicate) [with InputIterator=thrust::zip_iterator<thrust::tuple<thrust::detail::normal_iterator<thrust::device_ptr<vec3>>, thrust::detail::normal_iterator<thrust::device_ptr<long>>, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type>>, OutputIterator=thrust::device_vector<vec3, thrust::device_allocator<vec3>>, Predicate=FindValue]" 
cpp_addin_new2.cu(768): here

/usr/local/cuda/bin/../targets/x86_64-linux/include/thrust/detail/copy_if.inl(80): error: no instance of overloaded function "select_system" matches the argument list
            argument types are: (System1, System2)
          detected during instantiation of "OutputIterator thrust::copy_if(InputIterator, InputIterator, OutputIterator, Predicate) [with InputIterator=thrust::zip_iterator<thrust::tuple<thrust::detail::normal_iterator<thrust::device_ptr<vec3>>, thrust::detail::normal_iterator<thrust::device_ptr<long>>, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type>>, OutputIterator=thrust::device_vector<vec3, thrust::device_allocator<vec3>>, Predicate=FindValue]" 
cpp_addin_new2.cu(768): here

/usr/local/cuda/bin/../targets/x86_64-linux/include/thrust/detail/copy_if.inl(80): error: no instance of overloaded function "thrust::copy_if" matches the argument list
            argument types are: (<error-type>, thrust::zip_iterator<thrust::tuple<thrust::detail::normal_iterator<thrust::device_ptr<vec3>>, thrust::detail::normal_iterator<thrust::device_ptr<long>>, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type>>, thrust::zip_iterator<thrust::tuple<thrust::detail::normal_iterator<thrust::device_ptr<vec3>>, thrust::detail::normal_iterator<thrust::device_ptr<long>>, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type>>, thrust::device_vector<vec3, thrust::device_allocator<vec3>>, FindValue)
          detected during instantiation of "OutputIterator thrust::copy_if(InputIterator, InputIterator, OutputIterator, Predicate) [with InputIterator=thrust::zip_iterator<thrust::tuple<thrust::detail::normal_iterator<thrust::device_ptr<vec3>>, thrust::detail::normal_iterator<thrust::device_ptr<long>>, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type, thrust::null_type>>, OutputIterator=thrust::device_vector<vec3, thrust::device_allocator<vec3>>, Predicate=FindValue]" 
cpp_addin_new2.cu(768): here

3 errors detected in the compilation of "cpp_addin_new2.cu".

Answer 1

这正是 thrust::lower_bound 的设计目的。只需查看此处的示例代码。

https://thrust.github.io/doc/group__vectorized__binary__search_ga04b5a67cd0daf7be4b35c2bc75d22bee.html

Answer 2

您当前方法的主要问题是 thrust::device_vector 不能在设备代码中使用。仿函数需要存储指针和大小。数据类型也存在问题，例如，您有 long 值，并且想要复制值，但输出向量包含 vec3 即键。当前仿函数还搜索 to_find 值而不是键。

无论如何，一个正确的搜索键的仿函数看起来像这样。

template<class KeyType>
struct CopyIfPred{
    int numToFind;
    KeyType* to_find;

    __host__ __device__
    CopyIfPred(KeyType* to_find_, int numToFind_) : numToFind(numToFind_), to_find(to_find_){}

    template<class Tup>
    __host__ __device__
    bool operator()(const Tup& tup) const noexcept{
        const auto key = thrust::get<0>(tup);
        const bool found = thrust::binary_search(
            thrust::seq, 
            to_find, 
            to_find + numToFind, 
            key);
        return found;
    }
};

可以这样使用：

        auto begin = thrust::make_zip_iterator(thrust::make_tuple(
            keys1.begin(), 
            values.begin()
        ));
        auto end = begin + N;
        auto outputbegin = thrust::make_zip_iterator(thrust::make_tuple(
            thrust::make_discard_iterator(), // discard copied keys
            output.begin()
        ));

        CopyIfPred<KeyType> pred(
            thrust::raw_pointer_cast(to_find.data()), 
            to_find.size());


        auto endIters = thrust::copy_if(begin, end, outputbegin, pred);
        std::size_t outputsize = thrust::distance(outputbegin, endIters);

        for(std::size_t i = 0; i < outputsize; i++){
            std::cout << output[i] << "\n";
        }

cuda Thrust如何获取与键关联的值

cuda Thrust how to get the values associated to key

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