无法在 ubuntu 20.04 R 版本 4.1.3 上安装软件包“RcppArmadillo”

Question

我正在尝试为 ubuntu 上的闪亮服务器安装 'forecast' 软件包。我终端上的那个过程只是卡住了，一旦停止安装 - 它说：

ERROR: compilation failed for package ‘RcppArmadillo’

所以我尝试了但未能通过两种不同的方式安装 'RcppArmadillo'：

第一种方式通过 R（再次卡住）：

install.packages("RcppArmadillo")

and again it get stuck:
config.status: creating src/Makevars
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/local/lib/R/site-library/Rcpp/include'   -I../inst/include  -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-lENDSu/r-base-4.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c RcppArmadillo.cpp -o RcppArmadillo.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/local/lib/R/site-library/Rcpp/include'   -I../inst/include  -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-lENDSu/r-base-4.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/local/lib/R/site-library/Rcpp/include'   -I../inst/include  -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-lENDSu/r-base-4.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c fastLm.cpp -o fastLm.o
^Cmake: *** [/usr/lib/R/etc/Makeconf:177: fastLm.o] Interrupt
ERROR: compilation failed for package ‘RcppArmadillo’
* removing ‘/home/shiny/R/x86_64-pc-linux-gnu-library/4.1/RcppArmadillo’

第二种方式： $ sudo apt install r-cran-rcpparmadillo

Reading package lists... Done
Building dependency tree       
Reading state information... Done
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:

The following packages have unmet dependencies:
 r-cran-rcpparmadillo : Depends: r-api-3.5
                        Depends: r-cran-rcpp (>= 0.11.0) but it is not going to be installed
                        Depends: r-cran-pkgkitten but it is not going to be installed
E: Unable to correct problems, you have held broken packages.

有什么建议吗？提前致谢

Answer 1

这也是（实际上）常见问题解答。最好的办法是查看 README for Ubuntu at CRAN about 5k packages 以便添加 PPA。之后，sudo apt install r-cran-rcpparmadillo 将为您提供当前版本。

这是我在其中一个 Rocker Projects 容器中所做的：

RUN apt-get update \
    && apt-get install -y --no-install-recommends \
        software-properties-common \
        dirmngr \
        ed \
        less \
        locales \
        vim-tiny \
        wget \
        ca-certificates \
        && add-apt-repository --enable-source --yes "ppa:marutter/rrutter4.0" \
        && add-apt-repository --enable-source --yes "ppa:c2d4u.team/c2d4u4.0+"

您可能需要也可能不需要安装才能安装 dirmngr 和 software-properties-common，所以不妨试试

sudo add-apt-repository --enable-source --yes "ppa:marutter/rrutter4.0" 
sudo add-apt-repository --enable-source --yes "ppa:c2d4u.team/c2d4u4.0+"

如果您已经从 CRAN 获得当前 R，那么您 不需要 第一个，它是在 CRAN 镜像的源代码库。但是 c2d4u4.0+ 是你想要的 focal.

的 5000 多个二进制 CRAN 包

无法在 ubuntu 20.04 R 版本 4.1.3 上安装软件包“RcppArmadillo”

fail to install package ‘RcppArmadillo’ on ubuntu 20.04 R version 4.1.3

ubuntu

r

rcpparmadillo